Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
BdnfP21237 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
BdnfP21237 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
BdnfP21237 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC11.09□□□□□ -0.63
BdnfP21237 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
BdnfP21237 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
BdnfP21237 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC11.09□□□□□ -0.63
BdnfP21237 Gm42853-201ENSMUST00000201273 1387 ntBASIC11.09□□□□□ -0.63
BdnfP21237 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
BdnfP21237 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC11.09□□□□□ -0.63
BdnfP21237 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC11.09□□□□□ -0.63
BdnfP21237 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
BdnfP21237 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
BdnfP21237 Gm43438-201ENSMUST00000198133 379 ntBASIC11.09□□□□□ -0.63
BdnfP21237 Gm21769-201ENSMUST00000211922 111 ntBASIC11.09□□□□□ -0.63
BdnfP21237 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
BdnfP21237 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
BdnfP21237 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
BdnfP21237 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
BdnfP21237 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
BdnfP21237 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
BdnfP21237 Mapkap1-203ENSMUST00000113126 3018 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
BdnfP21237 Tmc5-202ENSMUST00000098088 3774 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
BdnfP21237 Gm45635-201ENSMUST00000211516 2134 ntBASIC11.09□□□□□ -0.63
BdnfP21237 Gm35850-202ENSMUST00000211705 2120 ntBASIC11.09□□□□□ -0.63
BdnfP21237 Ptpru-202ENSMUST00000097860 3365 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
BdnfP21237 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
BdnfP21237 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
BdnfP21237 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
BdnfP21237 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
BdnfP21237 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
BdnfP21237 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
BdnfP21237 Gm10152-201ENSMUST00000193475 1344 ntBASIC11.09□□□□□ -0.63
BdnfP21237 Btrc-209ENSMUST00000224478 2194 ntBASIC11.09□□□□□ -0.63
BdnfP21237 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.63
BdnfP21237 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.63
BdnfP21237 Rerg-201ENSMUST00000032347 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
BdnfP21237 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.63
BdnfP21237 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
BdnfP21237 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
BdnfP21237 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
BdnfP21237 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
BdnfP21237 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
BdnfP21237 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
BdnfP21237 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
BdnfP21237 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
BdnfP21237 Sumo3-203ENSMUST00000124024 776 ntTSL 2 BASIC11.08□□□□□ -0.64
BdnfP21237 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
BdnfP21237 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
BdnfP21237 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC11.08□□□□□ -0.64
BdnfP21237 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC11.08□□□□□ -0.64
BdnfP21237 Crip2-202ENSMUST00000196015 772 ntTSL 3 BASIC11.08□□□□□ -0.64
BdnfP21237 Gm45691-201ENSMUST00000206905 1120 ntBASIC11.08□□□□□ -0.64
BdnfP21237 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC11.08□□□□□ -0.64
BdnfP21237 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.08□□□□□ -0.64
BdnfP21237 CT571245.2-201ENSMUST00000218421 305 ntBASIC11.08□□□□□ -0.64
BdnfP21237 AC161537.1-201ENSMUST00000226199 1015 ntBASIC11.08□□□□□ -0.64
BdnfP21237 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.08□□□□□ -0.64
BdnfP21237 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
BdnfP21237 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
BdnfP21237 Ccdc162-212ENSMUST00000219054 3182 ntTSL 5 BASIC11.08□□□□□ -0.64
BdnfP21237 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
BdnfP21237 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
BdnfP21237 Gm43999-201ENSMUST00000204286 2889 ntBASIC11.08□□□□□ -0.64
BdnfP21237 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
BdnfP21237 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
BdnfP21237 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
BdnfP21237 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
BdnfP21237 Robo4-203ENSMUST00000115048 3392 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
BdnfP21237 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
BdnfP21237 Gm44415-201ENSMUST00000204151 2112 ntBASIC11.08□□□□□ -0.64
BdnfP21237 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
BdnfP21237 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
BdnfP21237 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
BdnfP21237 Gm29480-201ENSMUST00000188589 1655 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
BdnfP21237 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
BdnfP21237 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
BdnfP21237 AC121793.2-201ENSMUST00000217127 2728 ntTSL 5 BASIC11.08□□□□□ -0.64
BdnfP21237 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
BdnfP21237 M1ap-201ENSMUST00000113980 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
BdnfP21237 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
BdnfP21237 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
BdnfP21237 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
BdnfP21237 Bbs7-202ENSMUST00000108155 2437 ntTSL 5 BASIC11.07□□□□□ -0.64
BdnfP21237 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.07□□□□□ -0.64
BdnfP21237 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC11.07□□□□□ -0.64
BdnfP21237 Gm18222-201ENSMUST00000202416 1387 ntBASIC11.07□□□□□ -0.64
BdnfP21237 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
BdnfP21237 Cyb5rl-202ENSMUST00000106756 1604 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
BdnfP21237 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
BdnfP21237 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
BdnfP21237 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
BdnfP21237 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
BdnfP21237 Gm11564-201ENSMUST00000105055 691 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
BdnfP21237 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
BdnfP21237 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC11.07□□□□□ -0.64
BdnfP21237 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
BdnfP21237 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
BdnfP21237 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
BdnfP21237 Gm8885-201ENSMUST00000189382 598 ntBASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms