Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC11.05□□□□□ -0.64
Lire1P11260 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC11.05□□□□□ -0.64
Lire1P11260 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lire1P11260 Sparc-201ENSMUST00000018737 2300 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lire1P11260 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lire1P11260 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC11.05□□□□□ -0.64
Lire1P11260 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lire1P11260 AC153937.1-201ENSMUST00000218734 412 ntBASIC11.05□□□□□ -0.64
Lire1P11260 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lire1P11260 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lire1P11260 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lire1P11260 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Lire1P11260 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lire1P11260 CT868720.1-201ENSMUST00000223069 2544 ntBASIC11.05□□□□□ -0.64
Lire1P11260 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lire1P11260 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC11.05□□□□□ -0.64
Lire1P11260 Arhgap15os-201ENSMUST00000139948 1761 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lire1P11260 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.05□□□□□ -0.64
Lire1P11260 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lire1P11260 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lire1P11260 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Lire1P11260 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lire1P11260 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lire1P11260 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lire1P11260 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lire1P11260 Gm19445-201ENSMUST00000193649 2438 ntBASIC11.05□□□□□ -0.64
Lire1P11260 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lire1P11260 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lire1P11260 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lire1P11260 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Lire1P11260 Stim1-202ENSMUST00000209255 4362 ntTSL 5 BASIC11.05□□□□□ -0.64
Lire1P11260 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lire1P11260 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC11.04□□□□□ -0.64
Lire1P11260 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lire1P11260 AC154171.2-201ENSMUST00000225219 2652 ntBASIC11.04□□□□□ -0.64
Lire1P11260 Nrf1-207ENSMUST00000115206 1879 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lire1P11260 Erlin2-201ENSMUST00000033873 4838 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lire1P11260 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Lire1P11260 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Lire1P11260 Pde9a-201ENSMUST00000047168 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lire1P11260 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.04□□□□□ -0.64
Lire1P11260 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC11.04□□□□□ -0.64
Lire1P11260 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lire1P11260 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Lire1P11260 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lire1P11260 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lire1P11260 Arfgap3-201ENSMUST00000067215 2619 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lire1P11260 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lire1P11260 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lire1P11260 Gm11331-201ENSMUST00000119764 288 ntBASIC11.04□□□□□ -0.64
Lire1P11260 Gm12266-201ENSMUST00000120311 962 ntBASIC11.04□□□□□ -0.64
Lire1P11260 Gm13394-201ENSMUST00000121658 1000 ntBASIC11.04□□□□□ -0.64
Lire1P11260 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC11.04□□□□□ -0.64
Lire1P11260 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lire1P11260 Gm16296-201ENSMUST00000159905 325 ntBASIC11.04□□□□□ -0.64
Lire1P11260 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lire1P11260 Gm8018-201ENSMUST00000173536 789 ntBASIC11.04□□□□□ -0.64
Lire1P11260 Gnpda2-207ENSMUST00000173927 1011 ntAPPRIS ALT1 TSL 5 BASIC11.04□□□□□ -0.64
Lire1P11260 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lire1P11260 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lire1P11260 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lire1P11260 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lire1P11260 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lire1P11260 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lire1P11260 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lire1P11260 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lire1P11260 Gm43823-201ENSMUST00000197391 1808 ntBASIC11.04□□□□□ -0.64
Lire1P11260 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lire1P11260 Zbtb21-203ENSMUST00000113734 6010 ntAPPRIS P4 TSL 2 BASIC11.04□□□□□ -0.64
Lire1P11260 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.04□□□□□ -0.64
Lire1P11260 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lire1P11260 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lire1P11260 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lire1P11260 Sun1-203ENSMUST00000100517 1522 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lire1P11260 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lire1P11260 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Lire1P11260 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
Lire1P11260 Tekt3-201ENSMUST00000035732 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Lire1P11260 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lire1P11260 Sash3-201ENSMUST00000033427 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lire1P11260 Epx-201ENSMUST00000049768 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lire1P11260 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lire1P11260 Gm19967-201ENSMUST00000179676 2138 ntTSL 5 BASIC11.03□□□□□ -0.64
Lire1P11260 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lire1P11260 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.03□□□□□ -0.64
Lire1P11260 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lire1P11260 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lire1P11260 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lire1P11260 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lire1P11260 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lire1P11260 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lire1P11260 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lire1P11260 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Lire1P11260 5730460C07Rik-201ENSMUST00000081193 1834 ntTSL 2 BASIC11.03□□□□□ -0.64
Lire1P11260 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lire1P11260 Lipg-201ENSMUST00000066532 3787 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lire1P11260 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lire1P11260 Mylk3-202ENSMUST00000121972 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lire1P11260 Carhsp1-201ENSMUST00000008537 2849 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Lire1P11260 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 51.9 ms