Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NclP09405 Gm45594-201ENSMUST00000211717 241 ntBASIC17.11■□□□□ 0.33
NclP09405 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC17.11■□□□□ 0.33
NclP09405 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC17.11■□□□□ 0.33
NclP09405 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NclP09405 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NclP09405 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NclP09405 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NclP09405 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NclP09405 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
NclP09405 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NclP09405 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
NclP09405 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NclP09405 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NclP09405 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
NclP09405 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
NclP09405 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
NclP09405 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
NclP09405 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NclP09405 Gm4900-201ENSMUST00000222046 1628 ntBASIC17.1■□□□□ 0.33
NclP09405 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NclP09405 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NclP09405 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NclP09405 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NclP09405 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
NclP09405 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NclP09405 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NclP09405 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NclP09405 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC17.1■□□□□ 0.33
NclP09405 Gm15329-201ENSMUST00000121408 155 ntBASIC17.1■□□□□ 0.33
NclP09405 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC17.1■□□□□ 0.33
NclP09405 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
NclP09405 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NclP09405 Stx5a-219ENSMUST00000177373 995 ntTSL 5 BASIC17.1■□□□□ 0.33
NclP09405 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NclP09405 Gm19046-201ENSMUST00000221263 1298 ntBASIC17.1■□□□□ 0.33
NclP09405 AC102368.1-201ENSMUST00000227161 892 ntBASIC17.1■□□□□ 0.33
NclP09405 AC136376.2-201ENSMUST00000228819 490 ntBASIC17.1■□□□□ 0.33
NclP09405 Cmtm2a-201ENSMUST00000034344 1081 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NclP09405 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NclP09405 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NclP09405 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC17.1■□□□□ 0.33
NclP09405 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
NclP09405 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NclP09405 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
NclP09405 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NclP09405 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NclP09405 Gm44190-201ENSMUST00000205083 1401 ntBASIC17.1■□□□□ 0.33
NclP09405 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NclP09405 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NclP09405 Gm43174-201ENSMUST00000195914 2445 ntBASIC17.1■□□□□ 0.33
NclP09405 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
NclP09405 Nlrx1-202ENSMUST00000168499 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NclP09405 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NclP09405 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
NclP09405 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
NclP09405 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
NclP09405 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NclP09405 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
NclP09405 Gm18986-201ENSMUST00000216029 1986 ntBASIC17.09■□□□□ 0.33
NclP09405 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NclP09405 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC17.09■□□□□ 0.33
NclP09405 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NclP09405 Gm11789-203ENSMUST00000140645 737 ntTSL 2 BASIC17.09■□□□□ 0.33
NclP09405 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NclP09405 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
NclP09405 Gm29155-201ENSMUST00000185910 269 ntBASIC17.09■□□□□ 0.33
NclP09405 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
NclP09405 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC17.09■□□□□ 0.33
NclP09405 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NclP09405 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
NclP09405 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NclP09405 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NclP09405 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NclP09405 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC17.09■□□□□ 0.33
NclP09405 Serpinf2-202ENSMUST00000108437 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NclP09405 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NclP09405 Cep41-203ENSMUST00000115131 2256 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
NclP09405 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
NclP09405 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC17.09■□□□□ 0.33
NclP09405 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
NclP09405 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
NclP09405 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
NclP09405 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
NclP09405 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
NclP09405 Gm37600-201ENSMUST00000193764 3292 ntBASIC17.08■□□□□ 0.33
NclP09405 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
NclP09405 Gm5422-201ENSMUST00000050717 2721 ntBASIC17.08■□□□□ 0.33
NclP09405 Gm37859-201ENSMUST00000195529 2173 ntBASIC17.08■□□□□ 0.33
NclP09405 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NclP09405 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
NclP09405 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
NclP09405 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC17.08■□□□□ 0.32
NclP09405 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC17.08■□□□□ 0.32
NclP09405 Gm16219-201ENSMUST00000120096 274 ntBASIC17.08■□□□□ 0.32
NclP09405 Gm14395-201ENSMUST00000120494 563 ntBASIC17.08■□□□□ 0.32
NclP09405 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC17.08■□□□□ 0.32
NclP09405 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC17.08■□□□□ 0.32
NclP09405 Gm14154-201ENSMUST00000142642 579 ntTSL 3 BASIC17.08■□□□□ 0.32
NclP09405 Gm35960-201ENSMUST00000202712 767 ntBASIC17.08■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms