Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.21□□□□□ -0.45
TnfP06804 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TnfP06804 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC12.21□□□□□ -0.45
TnfP06804 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TnfP06804 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TnfP06804 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
TnfP06804 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
TnfP06804 Gm25148-201ENSMUST00000104611 123 ntBASIC12.21□□□□□ -0.45
TnfP06804 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
TnfP06804 Gm14892-201ENSMUST00000117636 267 ntBASIC12.21□□□□□ -0.45
TnfP06804 Gm15374-201ENSMUST00000119313 844 ntBASIC12.21□□□□□ -0.45
TnfP06804 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TnfP06804 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC12.21□□□□□ -0.45
TnfP06804 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TnfP06804 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TnfP06804 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
TnfP06804 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.21□□□□□ -0.45
TnfP06804 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC12.21□□□□□ -0.45
TnfP06804 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC12.21□□□□□ -0.45
TnfP06804 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.21□□□□□ -0.45
TnfP06804 Gm45856-201ENSMUST00000212752 416 ntBASIC12.21□□□□□ -0.45
TnfP06804 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TnfP06804 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
TnfP06804 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
TnfP06804 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC12.21□□□□□ -0.46
TnfP06804 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TnfP06804 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TnfP06804 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TnfP06804 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
TnfP06804 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TnfP06804 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
TnfP06804 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TnfP06804 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.21□□□□□ -0.46
TnfP06804 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
TnfP06804 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
TnfP06804 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TnfP06804 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.2□□□□□ -0.46
TnfP06804 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
TnfP06804 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
TnfP06804 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TnfP06804 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC12.2□□□□□ -0.46
TnfP06804 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TnfP06804 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TnfP06804 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TnfP06804 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
TnfP06804 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TnfP06804 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
TnfP06804 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC12.2□□□□□ -0.46
TnfP06804 Grip2-201ENSMUST00000159684 3006 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
TnfP06804 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TnfP06804 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TnfP06804 1700030J22Rik-201ENSMUST00000070577 2976 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TnfP06804 Prps1-201ENSMUST00000033809 1965 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TnfP06804 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TnfP06804 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
TnfP06804 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TnfP06804 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TnfP06804 Rps6kl1-202ENSMUST00000221972 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TnfP06804 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC12.2□□□□□ -0.46
TnfP06804 Gm12795-201ENSMUST00000117594 539 ntBASIC12.2□□□□□ -0.46
TnfP06804 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC12.2□□□□□ -0.46
TnfP06804 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TnfP06804 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TnfP06804 Gm22442-201ENSMUST00000157256 144 ntBASIC12.2□□□□□ -0.46
TnfP06804 Gm15744-201ENSMUST00000161734 213 ntBASIC12.2□□□□□ -0.46
TnfP06804 Mir7051-201ENSMUST00000184167 73 ntBASIC12.2□□□□□ -0.46
TnfP06804 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC12.2□□□□□ -0.46
TnfP06804 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TnfP06804 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC12.2□□□□□ -0.46
TnfP06804 CT010506.1-201ENSMUST00000223673 349 ntBASIC12.2□□□□□ -0.46
TnfP06804 CT009536.2-201ENSMUST00000225370 665 ntBASIC12.2□□□□□ -0.46
TnfP06804 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TnfP06804 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TnfP06804 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC12.2□□□□□ -0.46
TnfP06804 Gm10263-201ENSMUST00000085163 300 ntBASIC12.2□□□□□ -0.46
TnfP06804 Gm6509-201ENSMUST00000098286 1218 ntTSL 5 BASIC12.2□□□□□ -0.46
TnfP06804 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TnfP06804 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TnfP06804 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TnfP06804 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
TnfP06804 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
TnfP06804 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TnfP06804 Gm45902-202ENSMUST00000140494 2390 ntAPPRIS P1 TSL 2 BASIC12.2□□□□□ -0.46
TnfP06804 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
TnfP06804 Rab3c-202ENSMUST00000223922 2398 ntBASIC12.2□□□□□ -0.46
TnfP06804 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TnfP06804 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TnfP06804 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TnfP06804 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TnfP06804 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC12.2□□□□□ -0.46
TnfP06804 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
TnfP06804 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
TnfP06804 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.2□□□□□ -0.46
TnfP06804 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TnfP06804 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
TnfP06804 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
TnfP06804 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC12.19□□□□□ -0.46
TnfP06804 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
TnfP06804 Ptger4-202ENSMUST00000120563 3312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
TnfP06804 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms