Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
P06344 Gm43773-201ENSMUST00000198548 2162 ntBASIC10.29□□□□□ -0.76
P06344 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
P06344 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
P06344 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
P06344 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC10.29□□□□□ -0.76
P06344 Cd109-201ENSMUST00000093812 5860 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
P06344 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
P06344 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
P06344 Eno1-201ENSMUST00000080149 1902 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
P06344 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
P06344 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
P06344 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
P06344 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
P06344 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P06344 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.28□□□□□ -0.76
P06344 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P06344 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
P06344 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P06344 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P06344 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.28□□□□□ -0.76
P06344 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
P06344 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P06344 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
P06344 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC10.28□□□□□ -0.76
P06344 Gm11949-201ENSMUST00000117640 372 ntBASIC10.28□□□□□ -0.76
P06344 Gm15725-201ENSMUST00000119947 1090 ntBASIC10.28□□□□□ -0.76
P06344 Gm11836-201ENSMUST00000121022 441 ntBASIC10.28□□□□□ -0.76
P06344 Gm8737-201ENSMUST00000122208 642 ntBASIC10.28□□□□□ -0.76
P06344 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC10.28□□□□□ -0.76
P06344 Gm18367-201ENSMUST00000176139 600 ntBASIC10.28□□□□□ -0.76
P06344 Gm4654-201ENSMUST00000183305 982 ntBASIC10.28□□□□□ -0.76
P06344 Mir8115-201ENSMUST00000184992 119 ntBASIC10.28□□□□□ -0.76
P06344 Gm7467-201ENSMUST00000185173 652 ntBASIC10.28□□□□□ -0.76
P06344 Gm5051-201ENSMUST00000204085 485 ntBASIC10.28□□□□□ -0.76
P06344 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
P06344 Gm2517-201ENSMUST00000215651 348 ntBASIC10.28□□□□□ -0.76
P06344 CT030637.1-201ENSMUST00000228016 669 ntBASIC10.28□□□□□ -0.76
P06344 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
P06344 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
P06344 Gm4978-201ENSMUST00000071565 801 ntBASIC10.28□□□□□ -0.76
P06344 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
P06344 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
P06344 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
P06344 Gm18262-201ENSMUST00000222560 1946 ntBASIC10.28□□□□□ -0.76
P06344 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P06344 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.28□□□□□ -0.76
P06344 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.28□□□□□ -0.76
P06344 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
P06344 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P06344 AC167022.1-201ENSMUST00000218647 1458 ntBASIC10.28□□□□□ -0.76
P06344 Gm18986-201ENSMUST00000216029 1986 ntBASIC10.28□□□□□ -0.76
P06344 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P06344 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
P06344 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
P06344 Gm7642-201ENSMUST00000216345 1809 ntBASIC10.28□□□□□ -0.76
P06344 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
P06344 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
P06344 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
P06344 Ippk-201ENSMUST00000021817 2856 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
P06344 Gsdmcl-ps-203ENSMUST00000188367 1375 ntBASIC10.27□□□□□ -0.76
P06344 AC158355.1-201ENSMUST00000215895 1705 ntBASIC10.27□□□□□ -0.76
P06344 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
P06344 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
P06344 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
P06344 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
P06344 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
P06344 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
P06344 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
P06344 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P06344 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P06344 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
P06344 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.27□□□□□ -0.77
P06344 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P06344 Fam129a-203ENSMUST00000111875 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
P06344 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
P06344 Gm12029-201ENSMUST00000120073 832 ntBASIC10.27□□□□□ -0.77
P06344 Gm14585-201ENSMUST00000120713 634 ntBASIC10.27□□□□□ -0.77
P06344 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC10.27□□□□□ -0.77
P06344 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
P06344 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC10.27□□□□□ -0.77
P06344 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P06344 Gm21092-201ENSMUST00000178995 955 ntBASIC10.27□□□□□ -0.77
P06344 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
P06344 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC10.27□□□□□ -0.77
P06344 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC10.27□□□□□ -0.77
P06344 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
P06344 Gm43852-201ENSMUST00000202098 917 ntBASIC10.27□□□□□ -0.77
P06344 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
P06344 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC10.27□□□□□ -0.77
P06344 Gm45398-201ENSMUST00000210561 165 ntBASIC10.27□□□□□ -0.77
P06344 Gm18556-201ENSMUST00000219748 1031 ntBASIC10.27□□□□□ -0.77
P06344 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC10.27□□□□□ -0.77
P06344 AC129219.2-201ENSMUST00000224324 701 ntBASIC10.27□□□□□ -0.77
P06344 AC135469.1-201ENSMUST00000225984 772 ntBASIC10.27□□□□□ -0.77
P06344 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P06344 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P06344 Rpl10a-201ENSMUST00000042334 829 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
P06344 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
P06344 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms