Protein–RNA interactions for Protein: O89029

Matn4, Matrilin-4, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn4O89029 Gm17827-201ENSMUST00000211825 742 ntBASIC10.86□□□□□ -0.67
Matn4O89029 Aprt-ps-201ENSMUST00000212311 505 ntBASIC10.86□□□□□ -0.67
Matn4O89029 AC110091.1-201ENSMUST00000216004 691 ntTSL 3 BASIC10.86□□□□□ -0.67
Matn4O89029 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.86□□□□□ -0.67
Matn4O89029 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Matn4O89029 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Matn4O89029 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Matn4O89029 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Matn4O89029 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Matn4O89029 Gm10699-201ENSMUST00000098916 2130 ntBASIC10.86□□□□□ -0.67
Matn4O89029 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
Matn4O89029 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Matn4O89029 Gm38271-201ENSMUST00000192296 1603 ntBASIC10.86□□□□□ -0.67
Matn4O89029 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Matn4O89029 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Matn4O89029 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.86□□□□□ -0.67
Matn4O89029 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Matn4O89029 Gm26684-202ENSMUST00000228229 8257 ntBASIC10.86□□□□□ -0.67
Matn4O89029 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Matn4O89029 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Matn4O89029 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Matn4O89029 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Matn4O89029 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Matn4O89029 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Matn4O89029 Gm10652-201ENSMUST00000199790 2622 ntBASIC10.86□□□□□ -0.67
Matn4O89029 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.86□□□□□ -0.67
Matn4O89029 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Matn4O89029 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Matn4O89029 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Matn4O89029 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Matn4O89029 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Matn4O89029 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Matn4O89029 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Matn4O89029 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Matn4O89029 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Matn4O89029 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Matn4O89029 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Matn4O89029 Gm9072-201ENSMUST00000218390 1514 ntBASIC10.85□□□□□ -0.67
Matn4O89029 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.85□□□□□ -0.67
Matn4O89029 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Matn4O89029 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Matn4O89029 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC10.85□□□□□ -0.67
Matn4O89029 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC10.85□□□□□ -0.67
Matn4O89029 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Matn4O89029 Vamp5-202ENSMUST00000101285 623 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Matn4O89029 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Matn4O89029 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.85□□□□□ -0.67
Matn4O89029 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC10.85□□□□□ -0.67
Matn4O89029 Gm5150-201ENSMUST00000108347 913 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Matn4O89029 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC10.85□□□□□ -0.67
Matn4O89029 Gm12957-201ENSMUST00000117835 377 ntBASIC10.85□□□□□ -0.67
Matn4O89029 Gm7150-201ENSMUST00000122032 981 ntBASIC10.85□□□□□ -0.67
Matn4O89029 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Matn4O89029 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.85□□□□□ -0.67
Matn4O89029 Gm11944-201ENSMUST00000152576 873 ntTSL 3 BASIC10.85□□□□□ -0.67
Matn4O89029 1110008E08Rik-202ENSMUST00000183621 723 ntBASIC10.85□□□□□ -0.67
Matn4O89029 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC10.85□□□□□ -0.67
Matn4O89029 Gm38228-201ENSMUST00000193169 1293 ntBASIC10.85□□□□□ -0.67
Matn4O89029 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC10.85□□□□□ -0.67
Matn4O89029 AC113082.1-201ENSMUST00000217324 327 ntBASIC10.85□□□□□ -0.67
Matn4O89029 Gm9368-201ENSMUST00000219348 831 ntBASIC10.85□□□□□ -0.67
Matn4O89029 AC122371.3-201ENSMUST00000223402 1061 ntBASIC10.85□□□□□ -0.67
Matn4O89029 Ankrd2-201ENSMUST00000026172 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Matn4O89029 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Matn4O89029 Gm9200-201ENSMUST00000118513 1354 ntBASIC10.85□□□□□ -0.67
Matn4O89029 6030443J06Rik-202ENSMUST00000181374 1353 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Matn4O89029 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Matn4O89029 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC10.85□□□□□ -0.67
Matn4O89029 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Matn4O89029 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Matn4O89029 Wdr33-201ENSMUST00000025264 6206 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Matn4O89029 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Matn4O89029 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Matn4O89029 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Matn4O89029 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Matn4O89029 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Matn4O89029 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Matn4O89029 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Matn4O89029 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Matn4O89029 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.84□□□□□ -0.67
Matn4O89029 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Matn4O89029 Pigb-206ENSMUST00000184035 3221 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Matn4O89029 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Matn4O89029 Casc1-203ENSMUST00000111728 2682 ntAPPRIS ALT2 TSL 2 BASIC10.84□□□□□ -0.67
Matn4O89029 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Matn4O89029 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Matn4O89029 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Matn4O89029 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Matn4O89029 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Matn4O89029 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Matn4O89029 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Matn4O89029 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.84□□□□□ -0.67
Matn4O89029 Atad2-201ENSMUST00000038194 5684 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Matn4O89029 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Matn4O89029 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Matn4O89029 Gm13296-201ENSMUST00000117854 997 ntBASIC10.84□□□□□ -0.67
Matn4O89029 Gm15207-201ENSMUST00000119259 442 ntBASIC10.84□□□□□ -0.67
Matn4O89029 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Matn4O89029 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Matn4O89029 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 43.6 ms