Protein–RNA interactions for Protein: O88271

Cfdp1, Craniofacial development protein 1, mousemouse

Known RBP Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfdp1O88271 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfdp1O88271 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cfdp1O88271 Pdzk1-201ENSMUST00000058865 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfdp1O88271 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfdp1O88271 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cfdp1O88271 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfdp1O88271 Pdlim2-201ENSMUST00000022681 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfdp1O88271 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfdp1O88271 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfdp1O88271 Gm5740-201ENSMUST00000211003 1857 ntBASIC14.36□□□□□ -0.11
Cfdp1O88271 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cfdp1O88271 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC14.36□□□□□ -0.11
Cfdp1O88271 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cfdp1O88271 Gm1848-201ENSMUST00000120711 789 ntBASIC14.36□□□□□ -0.11
Cfdp1O88271 Gm13166-201ENSMUST00000123828 940 ntTSL 5 BASIC14.36□□□□□ -0.11
Cfdp1O88271 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC14.36□□□□□ -0.11
Cfdp1O88271 Gm13236-201ENSMUST00000153010 940 ntTSL 5 BASIC14.36□□□□□ -0.11
Cfdp1O88271 Gm6408-201ENSMUST00000179032 1171 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cfdp1O88271 Mir7076-201ENSMUST00000183519 74 ntBASIC14.36□□□□□ -0.11
Cfdp1O88271 Gm44329-201ENSMUST00000197469 112 ntBASIC14.36□□□□□ -0.11
Cfdp1O88271 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cfdp1O88271 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC14.36□□□□□ -0.11
Cfdp1O88271 Lect2-202ENSMUST00000225183 823 ntBASIC14.36□□□□□ -0.11
Cfdp1O88271 Gm9826-201ENSMUST00000029124 1299 ntBASIC14.36□□□□□ -0.11
Cfdp1O88271 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfdp1O88271 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfdp1O88271 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfdp1O88271 Cbx7-203ENSMUST00000109616 2899 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cfdp1O88271 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Cfdp1O88271 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Cfdp1O88271 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfdp1O88271 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfdp1O88271 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfdp1O88271 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfdp1O88271 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfdp1O88271 Ikbip-201ENSMUST00000020149 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfdp1O88271 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfdp1O88271 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfdp1O88271 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cfdp1O88271 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfdp1O88271 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfdp1O88271 Zmynd11-206ENSMUST00000110637 3770 ntTSL 5 BASIC14.36□□□□□ -0.11
Cfdp1O88271 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Cfdp1O88271 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Cfdp1O88271 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Cfdp1O88271 Brap-202ENSMUST00000111765 3861 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Cfdp1O88271 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cfdp1O88271 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfdp1O88271 Gm4780-202ENSMUST00000215200 2644 ntBASIC14.35□□□□□ -0.11
Cfdp1O88271 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfdp1O88271 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cfdp1O88271 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfdp1O88271 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfdp1O88271 Bub1-201ENSMUST00000028858 3421 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfdp1O88271 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cfdp1O88271 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cfdp1O88271 CT010447.1-201ENSMUST00000225657 1608 ntBASIC14.35□□□□□ -0.11
Cfdp1O88271 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfdp1O88271 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfdp1O88271 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cfdp1O88271 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC14.35□□□□□ -0.11
Cfdp1O88271 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC14.35□□□□□ -0.11
Cfdp1O88271 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC14.35□□□□□ -0.11
Cfdp1O88271 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cfdp1O88271 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cfdp1O88271 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC14.35□□□□□ -0.11
Cfdp1O88271 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cfdp1O88271 Pdcd5-ps-201ENSMUST00000191699 381 ntBASIC14.35□□□□□ -0.11
Cfdp1O88271 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC14.35□□□□□ -0.11
Cfdp1O88271 Gm44545-201ENSMUST00000208262 746 ntBASIC14.35□□□□□ -0.11
Cfdp1O88271 AC165260.2-203ENSMUST00000224237 336 ntBASIC14.35□□□□□ -0.11
Cfdp1O88271 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Cfdp1O88271 Tpx2-201ENSMUST00000028969 3654 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfdp1O88271 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfdp1O88271 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfdp1O88271 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfdp1O88271 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfdp1O88271 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cfdp1O88271 Ino80c-203ENSMUST00000141489 2207 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cfdp1O88271 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cfdp1O88271 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC14.35□□□□□ -0.11
Cfdp1O88271 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC14.35□□□□□ -0.11
Cfdp1O88271 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfdp1O88271 Becn1-205ENSMUST00000130916 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfdp1O88271 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC14.35□□□□□ -0.11
Cfdp1O88271 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfdp1O88271 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Cfdp1O88271 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Cfdp1O88271 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Cfdp1O88271 Dock6-201ENSMUST00000034728 6467 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Cfdp1O88271 CT025678.1-201ENSMUST00000214795 2972 ntBASIC14.34□□□□□ -0.11
Cfdp1O88271 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfdp1O88271 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfdp1O88271 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfdp1O88271 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfdp1O88271 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Cfdp1O88271 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC14.34□□□□□ -0.11
Cfdp1O88271 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Cfdp1O88271 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Cfdp1O88271 Mrps17-204ENSMUST00000119604 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 93.5 ms