Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Pdlim1O70400 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Pdlim1O70400 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim1O70400 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Pdlim1O70400 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim1O70400 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim1O70400 Gm42943-201ENSMUST00000199676 3242 ntBASIC11.43□□□□□ -0.58
Pdlim1O70400 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim1O70400 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim1O70400 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim1O70400 Gm15587-201ENSMUST00000146326 3493 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim1O70400 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim1O70400 Bbs1-201ENSMUST00000053506 5581 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim1O70400 Slc38a3-203ENSMUST00000177567 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim1O70400 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim1O70400 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim1O70400 AC121870.2-201ENSMUST00000214343 1870 ntBASIC11.43□□□□□ -0.58
Pdlim1O70400 Gm37122-201ENSMUST00000195313 1567 ntBASIC11.43□□□□□ -0.58
Pdlim1O70400 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.43□□□□□ -0.58
Pdlim1O70400 n-R5s64-201ENSMUST00000102019 119 ntBASIC11.43□□□□□ -0.58
Pdlim1O70400 Gm15432-201ENSMUST00000121106 195 ntBASIC11.43□□□□□ -0.58
Pdlim1O70400 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.43□□□□□ -0.58
Pdlim1O70400 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC11.43□□□□□ -0.58
Pdlim1O70400 Fundc1-204ENSMUST00000176638 448 ntTSL 3 BASIC11.43□□□□□ -0.58
Pdlim1O70400 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim1O70400 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim1O70400 Ighv5-11-201ENSMUST00000193354 371 ntBASIC11.43□□□□□ -0.58
Pdlim1O70400 Pmvk-204ENSMUST00000198440 978 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim1O70400 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.43□□□□□ -0.58
Pdlim1O70400 Gm17831-201ENSMUST00000205579 900 ntBASIC11.43□□□□□ -0.58
Pdlim1O70400 Gm44755-201ENSMUST00000207830 2102 ntBASIC11.43□□□□□ -0.58
Pdlim1O70400 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.43□□□□□ -0.58
Pdlim1O70400 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim1O70400 AC159819.2-201ENSMUST00000216151 342 ntBASIC11.43□□□□□ -0.58
Pdlim1O70400 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.43□□□□□ -0.58
Pdlim1O70400 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.43□□□□□ -0.58
Pdlim1O70400 Nsd1-205ENSMUST00000224693 852 ntBASIC11.43□□□□□ -0.58
Pdlim1O70400 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim1O70400 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim1O70400 Svopl-202ENSMUST00000096040 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim1O70400 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC11.43□□□□□ -0.58
Pdlim1O70400 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim1O70400 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.43□□□□□ -0.58
Pdlim1O70400 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Pdlim1O70400 Umod-201ENSMUST00000033263 2625 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim1O70400 Ramp1-201ENSMUST00000097648 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim1O70400 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim1O70400 Nfasc-203ENSMUST00000163770 3903 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Pdlim1O70400 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim1O70400 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim1O70400 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim1O70400 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Pdlim1O70400 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Pdlim1O70400 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim1O70400 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim1O70400 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim1O70400 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Pdlim1O70400 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim1O70400 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.42□□□□□ -0.58
Pdlim1O70400 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim1O70400 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.42□□□□□ -0.58
Pdlim1O70400 Vmn1r38-202ENSMUST00000227493 3486 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Pdlim1O70400 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim1O70400 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim1O70400 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
Pdlim1O70400 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim1O70400 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim1O70400 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim1O70400 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim1O70400 Ccl27a-203ENSMUST00000108033 428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim1O70400 Gm13408-201ENSMUST00000119822 798 ntBASIC11.42□□□□□ -0.58
Pdlim1O70400 Gm13935-201ENSMUST00000121859 798 ntBASIC11.42□□□□□ -0.58
Pdlim1O70400 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim1O70400 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim1O70400 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Pdlim1O70400 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim1O70400 Gm23045-201ENSMUST00000175041 96 ntBASIC11.42□□□□□ -0.58
Pdlim1O70400 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim1O70400 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim1O70400 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
Pdlim1O70400 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim1O70400 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Pdlim1O70400 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim1O70400 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim1O70400 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim1O70400 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
Pdlim1O70400 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Pdlim1O70400 Palld-204ENSMUST00000121785 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim1O70400 Fam214a-205ENSMUST00000215370 4205 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
Pdlim1O70400 Tgfb2-206ENSMUST00000195201 3485 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim1O70400 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
Pdlim1O70400 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim1O70400 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim1O70400 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC11.42□□□□□ -0.58
Pdlim1O70400 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim1O70400 Acsm1-201ENSMUST00000047929 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim1O70400 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim1O70400 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim1O70400 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Pdlim1O70400 Sgk2-201ENSMUST00000018012 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms