Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Anxa6-201ENSMUST00000102727 2471 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Pcdhgb4-202ENSMUST00000195363 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Gm26684-202ENSMUST00000228229 8257 ntBASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Cep97-203ENSMUST00000118500 3389 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Slc6a2-202ENSMUST00000165470 6007 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Mfsd4b5-203ENSMUST00000164566 2372 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 BC043934-202ENSMUST00000185694 2356 ntBASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Gm14137-201ENSMUST00000069711 3067 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Lax1-201ENSMUST00000169295 2309 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Tnfrsf11bO08712 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Vamp1-201ENSMUST00000032487 2772 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Gm7150-201ENSMUST00000122032 981 ntBASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Mir1938-201ENSMUST00000158746 100 ntBASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Gm45575-201ENSMUST00000210283 548 ntBASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 AC151275.1-201ENSMUST00000224870 585 ntBASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.67□□□□□ -0.54
Tnfrsf11bO08712 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Gm12463-201ENSMUST00000118271 849 ntBASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Gm14724-201ENSMUST00000118400 537 ntBASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Gm10807-201ENSMUST00000177134 795 ntBASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Gm16505-201ENSMUST00000179981 232 ntBASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Tnfrsf11bO08712 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC11.66□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms