Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Grm1-203ENSMUST00000105561 4435 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Ank2-221ENSMUST00000182994 2715 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Slc43a1-204ENSMUST00000121114 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Gm11783-201ENSMUST00000119549 885 ntBASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Mir7677-201ENSMUST00000184226 67 ntBASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Gm45433-201ENSMUST00000209386 247 ntBASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Ccl1-201ENSMUST00000021043 611 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 C030034L19Rik-203ENSMUST00000181930 3133 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Add2-203ENSMUST00000203279 1454 ntTSL 2 BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Acox3-203ENSMUST00000114237 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Ccnt1-208ENSMUST00000169707 7397 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Gm45206-201ENSMUST00000206885 2285 ntBASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Gm9544-201ENSMUST00000223349 2482 ntBASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Pcdh9F8VPK8 Ankrd55-202ENSMUST00000056047 1556 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Flnc-201ENSMUST00000065090 9038 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Trpv6-201ENSMUST00000031902 2923 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Gm9035-201ENSMUST00000218318 1697 ntBASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Gm21859-201ENSMUST00000178424 1045 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Gm28686-201ENSMUST00000187404 609 ntBASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Gm4857-201ENSMUST00000192718 785 ntBASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Gm37666-201ENSMUST00000194110 866 ntBASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Gm18038-201ENSMUST00000197900 485 ntBASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Epb41-207ENSMUST00000105975 5235 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Gm5525-201ENSMUST00000190438 1312 ntBASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Pcdh9F8VPK8 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Pcdh9F8VPK8 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms