Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hfm1D3Z4R1 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC15.96■□□□□ 0.15
Hfm1D3Z4R1 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hfm1D3Z4R1 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Hfm1D3Z4R1 Gm15815-201ENSMUST00000120569 255 ntBASIC15.96■□□□□ 0.15
Hfm1D3Z4R1 Mup-ps29-201ENSMUST00000122281 202 ntBASIC15.96■□□□□ 0.15
Hfm1D3Z4R1 Ighv1-70-201ENSMUST00000196509 351 ntBASIC15.96■□□□□ 0.15
Hfm1D3Z4R1 Gm35960-201ENSMUST00000202712 767 ntBASIC15.96■□□□□ 0.15
Hfm1D3Z4R1 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Hfm1D3Z4R1 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC15.96■□□□□ 0.15
Hfm1D3Z4R1 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hfm1D3Z4R1 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC15.96■□□□□ 0.15
Hfm1D3Z4R1 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hfm1D3Z4R1 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Hfm1D3Z4R1 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Hfm1D3Z4R1 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hfm1D3Z4R1 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hfm1D3Z4R1 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hfm1D3Z4R1 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Hfm1D3Z4R1 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Hfm1D3Z4R1 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Hfm1D3Z4R1 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Hfm1D3Z4R1 Atp5s-204ENSMUST00000220916 1599 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Hfm1D3Z4R1 Gm15984-202ENSMUST00000156466 1534 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Hfm1D3Z4R1 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Hfm1D3Z4R1 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Hist1h4i-201ENSMUST00000102977 727 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Snord17-201ENSMUST00000104526 238 ntBASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Gm13286-201ENSMUST00000117750 537 ntBASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Gm5526-201ENSMUST00000153604 423 ntBASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Zcwpw2-203ENSMUST00000187803 372 ntBASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Gm5254-201ENSMUST00000188353 977 ntBASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Gm42732-201ENSMUST00000202887 1197 ntBASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Leprot-201ENSMUST00000030254 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Fam114a2-202ENSMUST00000108850 1765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Bckdk-201ENSMUST00000071056 3405 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 CT010480.4-201ENSMUST00000224654 2283 ntBASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Enpp7-201ENSMUST00000092373 1370 ntAPPRIS P2 TSL 2 BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Gm27177-202ENSMUST00000183514 2703 ntBASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Hfm1D3Z4R1 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Ncbp2-202ENSMUST00000115178 515 ntTSL 5 BASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Gm12028-201ENSMUST00000118065 436 ntBASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Gm23582-201ENSMUST00000158530 139 ntBASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Gm5210-201ENSMUST00000182150 1010 ntBASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Gm29304-201ENSMUST00000186555 695 ntBASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Gm29223-201ENSMUST00000188867 695 ntBASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Gm37921-201ENSMUST00000194333 695 ntBASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Gm42689-201ENSMUST00000202403 404 ntBASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Gm30055-201ENSMUST00000203175 803 ntBASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Gm32591-203ENSMUST00000204725 696 ntTSL 3 BASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Lrit3-201ENSMUST00000179187 1683 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Hfm1D3Z4R1 Cyp2a21-ps-201ENSMUST00000206638 1471 ntBASIC15.94■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms