Protein–RNA interactions for Protein: D3YVI9

Trim30c, Tripartite motif-containing 30C, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim30cD3YVI9 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim30cD3YVI9 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trim30cD3YVI9 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim30cD3YVI9 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim30cD3YVI9 Rbm47-205ENSMUST00000167950 4895 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim30cD3YVI9 Ccdc57-201ENSMUST00000056781 3403 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim30cD3YVI9 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim30cD3YVI9 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trim30cD3YVI9 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim30cD3YVI9 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim30cD3YVI9 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim30cD3YVI9 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim30cD3YVI9 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim30cD3YVI9 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trim30cD3YVI9 Avpr2-202ENSMUST00000101470 2787 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim30cD3YVI9 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC12.68□□□□□ -0.38
Trim30cD3YVI9 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trim30cD3YVI9 AC160405.1-201ENSMUST00000218207 1545 ntBASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Igsf1-204ENSMUST00000114893 2671 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Zfp957-202ENSMUST00000161649 2751 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Tardbp-204ENSMUST00000105699 1904 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Gm24990-201ENSMUST00000157406 323 ntBASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Gm17812-201ENSMUST00000204935 318 ntBASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Gm5363-201ENSMUST00000211927 938 ntBASIC12.67□□□□□ -0.38
Trim30cD3YVI9 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Defb22-201ENSMUST00000028966 628 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Gm8385-201ENSMUST00000058999 643 ntBASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Mical2-202ENSMUST00000050149 6669 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Gm5846-201ENSMUST00000193146 1414 ntBASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Car14-201ENSMUST00000036181 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Cyp2t4-202ENSMUST00000164093 1512 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Zfp61-208ENSMUST00000165241 1668 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Ggt1-208ENSMUST00000134503 2140 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC12.67□□□□□ -0.38
Trim30cD3YVI9 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim30cD3YVI9 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim30cD3YVI9 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trim30cD3YVI9 Cacna1c-226ENSMUST00000219833 7591 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim30cD3YVI9 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim30cD3YVI9 Fyn-206ENSMUST00000136659 1910 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim30cD3YVI9 Bcl9l-203ENSMUST00000218183 6771 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Trim30cD3YVI9 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim30cD3YVI9 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim30cD3YVI9 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim30cD3YVI9 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim30cD3YVI9 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim30cD3YVI9 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim30cD3YVI9 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim30cD3YVI9 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim30cD3YVI9 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim30cD3YVI9 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim30cD3YVI9 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trim30cD3YVI9 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Trim30cD3YVI9 Gm14277-201ENSMUST00000121195 360 ntBASIC12.66□□□□□ -0.38
Trim30cD3YVI9 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim30cD3YVI9 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC12.66□□□□□ -0.38
Trim30cD3YVI9 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim30cD3YVI9 Gm20537-202ENSMUST00000173131 889 ntAPPRIS P5 TSL 5 BASIC12.66□□□□□ -0.38
Trim30cD3YVI9 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Trim30cD3YVI9 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim30cD3YVI9 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC12.66□□□□□ -0.38
Trim30cD3YVI9 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim30cD3YVI9 Gm45433-201ENSMUST00000209386 247 ntBASIC12.66□□□□□ -0.38
Trim30cD3YVI9 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC12.66□□□□□ -0.38
Trim30cD3YVI9 AC154757.2-201ENSMUST00000228885 743 ntBASIC12.66□□□□□ -0.38
Trim30cD3YVI9 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trim30cD3YVI9 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trim30cD3YVI9 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms