Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Acvrl1-205ENSMUST00000120754 3506 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Mapk8ip3-204ENSMUST00000117509 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Gm18210-201ENSMUST00000209001 1524 ntBASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Mir1905-201ENSMUST00000122779 82 ntBASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Gm15620-201ENSMUST00000122949 270 ntBASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Gm22846-201ENSMUST00000157706 270 ntBASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Gm4982-201ENSMUST00000160440 1098 ntBASIC13.31□□□□□ -0.28
Clrn2B2RVW2 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Nanos3-202ENSMUST00000210202 692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Gm26670-202ENSMUST00000226862 340 ntBASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Gm8181-201ENSMUST00000062242 669 ntBASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Tdpoz3-201ENSMUST00000081780 1098 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Rab7-201ENSMUST00000095048 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 CT025624.1-201ENSMUST00000224007 2700 ntBASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Clrn2B2RVW2 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC13.3□□□□□ -0.28
Clrn2B2RVW2 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC13.3□□□□□ -0.28
Clrn2B2RVW2 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn2B2RVW2 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.3□□□□□ -0.28
Clrn2B2RVW2 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn2B2RVW2 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Clrn2B2RVW2 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Clrn2B2RVW2 Smok4a-201ENSMUST00000074512 1455 ntBASIC13.3□□□□□ -0.28
Clrn2B2RVW2 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn2B2RVW2 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn2B2RVW2 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Clrn2B2RVW2 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Clrn2B2RVW2 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn2B2RVW2 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn2B2RVW2 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn2B2RVW2 Gm14993-201ENSMUST00000121180 164 ntBASIC13.3□□□□□ -0.28
Clrn2B2RVW2 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn2B2RVW2 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn2B2RVW2 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC13.3□□□□□ -0.28
Clrn2B2RVW2 Gm17221-201ENSMUST00000163909 481 ntBASIC13.3□□□□□ -0.28
Clrn2B2RVW2 Gm17073-201ENSMUST00000168069 556 ntBASIC13.3□□□□□ -0.28
Clrn2B2RVW2 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn2B2RVW2 Gm28262-201ENSMUST00000185463 477 ntTSL 5 BASIC13.3□□□□□ -0.28
Clrn2B2RVW2 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC13.3□□□□□ -0.28
Clrn2B2RVW2 Gm42430-201ENSMUST00000197209 616 ntBASIC13.3□□□□□ -0.28
Clrn2B2RVW2 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn2B2RVW2 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn2B2RVW2 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn2B2RVW2 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC13.3□□□□□ -0.28
Clrn2B2RVW2 Taar7f-201ENSMUST00000071691 1077 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Clrn2B2RVW2 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Clrn2B2RVW2 Taar7d-201ENSMUST00000092657 1077 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Clrn2B2RVW2 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn2B2RVW2 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn2B2RVW2 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn2B2RVW2 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn2B2RVW2 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Clrn2B2RVW2 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Clrn2B2RVW2 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Clrn2B2RVW2 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clrn2B2RVW2 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clrn2B2RVW2 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clrn2B2RVW2 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clrn2B2RVW2 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Clrn2B2RVW2 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clrn2B2RVW2 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Clrn2B2RVW2 Gm6024-201ENSMUST00000117850 1558 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms