Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Chd6A3KFM7 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Chd6A3KFM7 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC9.28□□□□□ -0.92
Chd6A3KFM7 Ajuba-201ENSMUST00000054487 3397 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Chd6A3KFM7 Igsf11-202ENSMUST00000114706 1578 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Chd6A3KFM7 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Chd6A3KFM7 N4bp2l1-201ENSMUST00000016279 1905 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Chd6A3KFM7 Gm37861-201ENSMUST00000193534 2869 ntBASIC9.28□□□□□ -0.92
Chd6A3KFM7 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Chd6A3KFM7 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Chd6A3KFM7 Gm44260-201ENSMUST00000204946 2094 ntBASIC9.27□□□□□ -0.92
Chd6A3KFM7 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Chd6A3KFM7 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Chd6A3KFM7 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC9.27□□□□□ -0.92
Chd6A3KFM7 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Chd6A3KFM7 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Chd6A3KFM7 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Chd6A3KFM7 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Chd6A3KFM7 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Chd6A3KFM7 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Chd6A3KFM7 Gm16219-201ENSMUST00000120096 274 ntBASIC9.27□□□□□ -0.92
Chd6A3KFM7 Ptpa-210ENSMUST00000136009 810 ntTSL 3 BASIC9.27□□□□□ -0.92
Chd6A3KFM7 Gm26047-201ENSMUST00000157308 113 ntBASIC9.27□□□□□ -0.92
Chd6A3KFM7 Gm21778-201ENSMUST00000178779 471 ntBASIC9.27□□□□□ -0.92
Chd6A3KFM7 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Chd6A3KFM7 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Chd6A3KFM7 Gm37688-201ENSMUST00000195195 465 ntBASIC9.27□□□□□ -0.92
Chd6A3KFM7 Gm44323-201ENSMUST00000198689 129 ntBASIC9.27□□□□□ -0.92
Chd6A3KFM7 Gm26047-202ENSMUST00000198840 115 ntBASIC9.27□□□□□ -0.92
Chd6A3KFM7 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC9.27□□□□□ -0.92
Chd6A3KFM7 H2al1m-201ENSMUST00000073949 535 ntAPPRIS P1 BASIC9.27□□□□□ -0.92
Chd6A3KFM7 Gm26132-201ENSMUST00000083166 148 ntBASIC9.27□□□□□ -0.92
Chd6A3KFM7 Sprr2a2-202ENSMUST00000090871 722 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Chd6A3KFM7 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC9.27□□□□□ -0.92
Chd6A3KFM7 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.92
Chd6A3KFM7 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Chd6A3KFM7 Exosc9-201ENSMUST00000029269 1617 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Chd6A3KFM7 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Gm42840-201ENSMUST00000200303 2251 ntBASIC9.27□□□□□ -0.93
Chd6A3KFM7 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Tcf4-205ENSMUST00000114980 2192 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Sesn2-201ENSMUST00000030724 3475 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Prc1-211ENSMUST00000174199 2128 ntTSL 5 BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Gm15132-201ENSMUST00000118581 652 ntBASIC9.27□□□□□ -0.93
Chd6A3KFM7 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC9.27□□□□□ -0.93
Chd6A3KFM7 Gm14145-201ENSMUST00000133385 508 ntTSL 3 BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Gm14146-201ENSMUST00000155885 508 ntTSL 5 BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Gm22669-201ENSMUST00000158723 318 ntBASIC9.27□□□□□ -0.93
Chd6A3KFM7 2010008C14Rik-201ENSMUST00000203956 593 ntBASIC9.27□□□□□ -0.93
Chd6A3KFM7 Gm35298-201ENSMUST00000222719 430 ntTSL 5 BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Chd6A3KFM7 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Mpp4-204ENSMUST00000186477 1885 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Chd6A3KFM7 AC165351.1-201ENSMUST00000219078 2020 ntBASIC9.27□□□□□ -0.93
Chd6A3KFM7 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Lmnb2-204ENSMUST00000179022 3370 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Gpr151-201ENSMUST00000054738 1633 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Acnat1-201ENSMUST00000095086 1499 ntAPPRIS P2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Gm9415-201ENSMUST00000200462 1321 ntBASIC9.27□□□□□ -0.93
Chd6A3KFM7 Prr27-201ENSMUST00000002310 1313 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Chd6A3KFM7 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Gm8111-201ENSMUST00000117659 987 ntBASIC9.26□□□□□ -0.93
Chd6A3KFM7 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Gm25343-201ENSMUST00000157460 107 ntBASIC9.26□□□□□ -0.93
Chd6A3KFM7 Gm17197-201ENSMUST00000163160 452 ntTSL 2 BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Prdx5-204ENSMUST00000173091 501 ntTSL 5 BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Ighv6-4-201ENSMUST00000177949 297 ntAPPRIS P1 BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Gm29642-201ENSMUST00000186170 921 ntTSL 2 BASIC9.26□□□□□ -0.93
Chd6A3KFM7 1700063D05Rik-203ENSMUST00000191461 666 ntTSL 2 BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
Chd6A3KFM7 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms