Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn3aA2ASI5 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Scn3aA2ASI5 Plekhg4-201ENSMUST00000014927 4167 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Scn3aA2ASI5 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC12.74□□□□□ -0.37
Scn3aA2ASI5 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Scn3aA2ASI5 Gm22146-201ENSMUST00000157397 288 ntBASIC12.74□□□□□ -0.37
Scn3aA2ASI5 A930005H10Rik-204ENSMUST00000185681 625 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Scn3aA2ASI5 A930005H10Rik-206ENSMUST00000188260 739 ntTSL 2 BASIC12.74□□□□□ -0.37
Scn3aA2ASI5 Gm5298-201ENSMUST00000201122 892 ntBASIC12.74□□□□□ -0.37
Scn3aA2ASI5 Il18-203ENSMUST00000213916 885 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Scn3aA2ASI5 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC12.74□□□□□ -0.37
Scn3aA2ASI5 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn3aA2ASI5 Cib4-201ENSMUST00000065486 769 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn3aA2ASI5 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn3aA2ASI5 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn3aA2ASI5 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Scn3aA2ASI5 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn3aA2ASI5 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn3aA2ASI5 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn3aA2ASI5 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Scn3aA2ASI5 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn3aA2ASI5 AC109214.1-201ENSMUST00000219520 1372 ntBASIC12.73□□□□□ -0.37
Scn3aA2ASI5 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn3aA2ASI5 Rsl24d1-201ENSMUST00000034738 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn3aA2ASI5 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC12.73□□□□□ -0.37
Scn3aA2ASI5 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn3aA2ASI5 Gm37931-201ENSMUST00000194686 2866 ntBASIC12.73□□□□□ -0.37
Scn3aA2ASI5 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.73□□□□□ -0.37
Scn3aA2ASI5 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn3aA2ASI5 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn3aA2ASI5 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scn3aA2ASI5 Pet100-201ENSMUST00000156380 1193 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn3aA2ASI5 Gm18201-201ENSMUST00000174735 875 ntBASIC12.73□□□□□ -0.37
Scn3aA2ASI5 Sbsn-205ENSMUST00000182721 677 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
Scn3aA2ASI5 Gm5700-201ENSMUST00000191483 989 ntBASIC12.73□□□□□ -0.37
Scn3aA2ASI5 Gm9487-201ENSMUST00000216600 472 ntBASIC12.73□□□□□ -0.37
Scn3aA2ASI5 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn3aA2ASI5 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scn3aA2ASI5 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn3aA2ASI5 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.73□□□□□ -0.37
Scn3aA2ASI5 Gm44056-201ENSMUST00000204623 1427 ntBASIC12.73□□□□□ -0.37
Scn3aA2ASI5 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scn3aA2ASI5 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn3aA2ASI5 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn3aA2ASI5 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Scn3aA2ASI5 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn3aA2ASI5 Mxd1-201ENSMUST00000001184 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn3aA2ASI5 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Scn3aA2ASI5 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn3aA2ASI5 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn3aA2ASI5 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Scn3aA2ASI5 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Scn3aA2ASI5 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC12.72□□□□□ -0.37
Scn3aA2ASI5 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Scn3aA2ASI5 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Scn3aA2ASI5 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn3aA2ASI5 Gm28306-201ENSMUST00000191315 529 ntTSL 5 BASIC12.72□□□□□ -0.37
Scn3aA2ASI5 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC12.72□□□□□ -0.37
Scn3aA2ASI5 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC12.72□□□□□ -0.37
Scn3aA2ASI5 Gm44647-201ENSMUST00000207402 428 ntBASIC12.72□□□□□ -0.37
Scn3aA2ASI5 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Scn3aA2ASI5 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Scn3aA2ASI5 Slc12a9-201ENSMUST00000039991 3330 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn3aA2ASI5 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn3aA2ASI5 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn3aA2ASI5 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn3aA2ASI5 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC12.72□□□□□ -0.37
Scn3aA2ASI5 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Scn3aA2ASI5 Ube2q2-203ENSMUST00000122441 2081 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn3aA2ASI5 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn3aA2ASI5 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn3aA2ASI5 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Scn3aA2ASI5 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn3aA2ASI5 Mtap-201ENSMUST00000058030 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn3aA2ASI5 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn3aA2ASI5 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn3aA2ASI5 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Scn3aA2ASI5 Gm9081-201ENSMUST00000182346 991 ntBASIC12.72□□□□□ -0.37
Scn3aA2ASI5 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Scn3aA2ASI5 Gm42660-201ENSMUST00000197733 947 ntBASIC12.72□□□□□ -0.37
Scn3aA2ASI5 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC12.72□□□□□ -0.37
Scn3aA2ASI5 AC154176.1-201ENSMUST00000225897 220 ntBASIC12.72□□□□□ -0.37
Scn3aA2ASI5 Gm7536-201ENSMUST00000077389 444 ntBASIC12.72□□□□□ -0.37
Scn3aA2ASI5 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Scn3aA2ASI5 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn3aA2ASI5 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Scn3aA2ASI5 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Scn3aA2ASI5 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn3aA2ASI5 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn3aA2ASI5 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC12.71□□□□□ -0.37
Scn3aA2ASI5 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn3aA2ASI5 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Scn3aA2ASI5 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn3aA2ASI5 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Scn3aA2ASI5 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn3aA2ASI5 Gm44153-201ENSMUST00000204162 1580 ntBASIC12.71□□□□□ -0.37
Scn3aA2ASI5 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC12.71□□□□□ -0.37
Scn3aA2ASI5 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Scn3aA2ASI5 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Scn3aA2ASI5 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms