Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 Hyal3-202ENSMUST00000148440 1380 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 Gucy2e-203ENSMUST00000108665 3645 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 Zfp536-202ENSMUST00000175941 4423 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 Strada-202ENSMUST00000103072 1517 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 Mrpl45-201ENSMUST00000019026 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Prpf40aQ9R1C7 Gm43242-201ENSMUST00000199507 1776 ntBASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 Btnl7-ps-201ENSMUST00000023469 1763 ntBASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 Msra-201ENSMUST00000067927 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 Gm26857-201ENSMUST00000181580 3347 ntTSL 5 BASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 Gm25881-201ENSMUST00000157783 103 ntBASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 H2-Q3-201ENSMUST00000172583 608 ntBASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 Rps4l-202ENSMUST00000204242 789 ntBASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 AC133602.1-201ENSMUST00000227510 509 ntBASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 Orc4-202ENSMUST00000090976 1153 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 Gm21811-201ENSMUST00000096485 930 ntBASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 CU062626.3-201ENSMUST00000225522 1411 ntBASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 Tex45-203ENSMUST00000161680 1526 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 Kifc2-201ENSMUST00000004294 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 Zbtb24-205ENSMUST00000216656 2476 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 Hhipl2-201ENSMUST00000065900 2525 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Prpf40aQ9R1C7 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Madd-208ENSMUST00000111370 5879 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Madd-214ENSMUST00000111381 5873 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Gaa-203ENSMUST00000106259 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Cyp2d34-201ENSMUST00000109515 1622 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Gm11663-201ENSMUST00000117888 290 ntBASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Gm8566-201ENSMUST00000120174 465 ntBASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Gm23085-201ENSMUST00000157849 293 ntBASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Gm38228-201ENSMUST00000193169 1293 ntBASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 AU022133-201ENSMUST00000200601 873 ntBASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Abhd14b-210ENSMUST00000217496 631 ntTSL 5 BASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 AC159747.1-201ENSMUST00000219903 265 ntBASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Crabp2-201ENSMUST00000005019 931 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Grin2b-202ENSMUST00000111905 7484 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Psapl1-201ENSMUST00000052224 2548 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Prpf40aQ9R1C7 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Tcf4-252ENSMUST00000202477 1873 ntTSL 5 BASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 Pcgf2-202ENSMUST00000103148 1438 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Prpf40aQ9R1C7 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms