Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 4930593A02Rik-201ENSMUST00000181694 1437 ntTSL 5 BASIC11.1□□□□□ -0.63
SrfQ9JM73 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
SrfQ9JM73 AC130823.1-201ENSMUST00000228929 1549 ntBASIC11.1□□□□□ -0.63
SrfQ9JM73 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SrfQ9JM73 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SrfQ9JM73 Magee1-201ENSMUST00000033578 3550 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
SrfQ9JM73 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SrfQ9JM73 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
SrfQ9JM73 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SrfQ9JM73 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SrfQ9JM73 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SrfQ9JM73 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SrfQ9JM73 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SrfQ9JM73 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC11.1□□□□□ -0.63
SrfQ9JM73 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SrfQ9JM73 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SrfQ9JM73 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SrfQ9JM73 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SrfQ9JM73 Gm11858-201ENSMUST00000117935 838 ntBASIC11.1□□□□□ -0.63
SrfQ9JM73 Gm12788-201ENSMUST00000119090 308 ntBASIC11.1□□□□□ -0.63
SrfQ9JM73 Rpl10-ps1-201ENSMUST00000119438 645 ntBASIC11.1□□□□□ -0.63
SrfQ9JM73 Rbm3os-201ENSMUST00000124018 839 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SrfQ9JM73 Gm14426-201ENSMUST00000128562 249 ntTSL 3 BASIC11.1□□□□□ -0.63
SrfQ9JM73 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SrfQ9JM73 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SrfQ9JM73 Samd13-204ENSMUST00000147113 729 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SrfQ9JM73 Gm7289-201ENSMUST00000168993 734 ntBASIC11.1□□□□□ -0.63
SrfQ9JM73 Ighv1-76-201ENSMUST00000169155 294 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
SrfQ9JM73 Ighv1-62-1-202ENSMUST00000171270 90 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
SrfQ9JM73 Gm17709-201ENSMUST00000174536 1096 ntBASIC11.1□□□□□ -0.63
SrfQ9JM73 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.1□□□□□ -0.63
SrfQ9JM73 C920009B18Rik-203ENSMUST00000181643 1004 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SrfQ9JM73 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SrfQ9JM73 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.1□□□□□ -0.63
SrfQ9JM73 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC11.1□□□□□ -0.63
SrfQ9JM73 Gm20852-202ENSMUST00000188011 1224 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SrfQ9JM73 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SrfQ9JM73 Gm18348-201ENSMUST00000191227 820 ntBASIC11.1□□□□□ -0.63
SrfQ9JM73 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SrfQ9JM73 C230057A21Rik-202ENSMUST00000195781 600 ntTSL 3 BASIC11.1□□□□□ -0.63
SrfQ9JM73 Gm43778-201ENSMUST00000199438 199 ntBASIC11.1□□□□□ -0.63
SrfQ9JM73 1700113A16Rik-203ENSMUST00000200006 563 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SrfQ9JM73 Gm42588-201ENSMUST00000200538 1297 ntBASIC11.1□□□□□ -0.63
SrfQ9JM73 Gm44124-201ENSMUST00000204159 472 ntBASIC11.1□□□□□ -0.63
SrfQ9JM73 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC11.1□□□□□ -0.63
SrfQ9JM73 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC11.1□□□□□ -0.63
SrfQ9JM73 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.1□□□□□ -0.63
SrfQ9JM73 AC116589.9-201ENSMUST00000221462 908 ntBASIC11.1□□□□□ -0.63
SrfQ9JM73 AC153152.3-201ENSMUST00000222188 1135 ntBASIC11.1□□□□□ -0.63
SrfQ9JM73 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SrfQ9JM73 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SrfQ9JM73 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SrfQ9JM73 Olfr834-201ENSMUST00000086492 939 ntAPPRIS P1 BASIC11.1□□□□□ -0.63
SrfQ9JM73 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SrfQ9JM73 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SrfQ9JM73 Gm42736-201ENSMUST00000200723 1353 ntBASIC11.1□□□□□ -0.63
SrfQ9JM73 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SrfQ9JM73 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
SrfQ9JM73 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.1□□□□□ -0.63
SrfQ9JM73 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SrfQ9JM73 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SrfQ9JM73 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SrfQ9JM73 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
SrfQ9JM73 Vrk1-204ENSMUST00000220629 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SrfQ9JM73 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SrfQ9JM73 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.1□□□□□ -0.63
SrfQ9JM73 5830411N06Rik-202ENSMUST00000093984 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
SrfQ9JM73 Gm9415-201ENSMUST00000200462 1321 ntBASIC11.09□□□□□ -0.63
SrfQ9JM73 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SrfQ9JM73 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
SrfQ9JM73 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
SrfQ9JM73 Actb-201ENSMUST00000100497 1920 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SrfQ9JM73 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
SrfQ9JM73 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.09□□□□□ -0.63
SrfQ9JM73 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SrfQ9JM73 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SrfQ9JM73 2410002F23Rik-205ENSMUST00000107949 3610 ntAPPRIS P2 TSL 2 BASIC11.09□□□□□ -0.63
SrfQ9JM73 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
SrfQ9JM73 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SrfQ9JM73 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SrfQ9JM73 Map1b-203ENSMUST00000223725 2669 ntBASIC11.09□□□□□ -0.63
SrfQ9JM73 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SrfQ9JM73 Sufu-204ENSMUST00000120778 1850 ntTSL 2 BASIC11.09□□□□□ -0.63
SrfQ9JM73 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
SrfQ9JM73 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SrfQ9JM73 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
SrfQ9JM73 Gm7350-201ENSMUST00000120964 636 ntBASIC11.09□□□□□ -0.63
SrfQ9JM73 Gm14993-201ENSMUST00000121180 164 ntBASIC11.09□□□□□ -0.63
SrfQ9JM73 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
SrfQ9JM73 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC11.09□□□□□ -0.63
SrfQ9JM73 Gm25554-201ENSMUST00000158075 113 ntBASIC11.09□□□□□ -0.63
SrfQ9JM73 Gm16553-201ENSMUST00000160490 716 ntTSL 3 BASIC11.09□□□□□ -0.63
SrfQ9JM73 AC238811.4-201ENSMUST00000178019 1246 ntBASIC11.09□□□□□ -0.63
SrfQ9JM73 AC238940.3-201ENSMUST00000178830 1246 ntBASIC11.09□□□□□ -0.63
SrfQ9JM73 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SrfQ9JM73 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.09□□□□□ -0.63
SrfQ9JM73 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
SrfQ9JM73 Gm20379-201ENSMUST00000188317 1204 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
SrfQ9JM73 Gm42836-201ENSMUST00000197198 728 ntTSL 5 BASIC11.09□□□□□ -0.63
SrfQ9JM73 Gm44647-201ENSMUST00000207402 428 ntBASIC11.09□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms