Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Serpina1b-203ENSMUST00000186166 1762 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Gm28719-201ENSMUST00000187779 1757 ntBASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Zfp941-201ENSMUST00000080651 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Col4a3-201ENSMUST00000113457 8554 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Slc2a7-201ENSMUST00000059893 1578 ntAPPRIS P1 TSL 5 BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Olfr56-202ENSMUST00000102785 1930 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
Sec61a2Q9JLR1 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Gm42498-201ENSMUST00000199981 1372 ntBASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Gm45871-202ENSMUST00000209969 1368 ntTSL 5 BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Gm12217-201ENSMUST00000118858 696 ntBASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Gm15711-201ENSMUST00000118889 535 ntBASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Gm15004-201ENSMUST00000119192 630 ntBASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Gm18558-201ENSMUST00000186253 1214 ntBASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 AY036118-201ENSMUST00000200021 923 ntBASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Gm34728-201ENSMUST00000201510 414 ntTSL 3 BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Prop1-201ENSMUST00000051159 1133 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Gm5705-201ENSMUST00000066241 711 ntBASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Gm25007-201ENSMUST00000083808 133 ntBASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Gm20125-205ENSMUST00000208005 1979 ntTSL 5 BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Gabrr2-202ENSMUST00000108162 1933 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Bahcc1-203ENSMUST00000122148 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Phyhipl-201ENSMUST00000046513 2877 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Olfr177-202ENSMUST00000217377 2401 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC10.42□□□□□ -0.74
Sec61a2Q9JLR1 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a2Q9JLR1 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a2Q9JLR1 4930431P19Rik-202ENSMUST00000207761 2959 ntBASIC10.41□□□□□ -0.74
Sec61a2Q9JLR1 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a2Q9JLR1 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a2Q9JLR1 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a2Q9JLR1 Il1rap-202ENSMUST00000096129 4438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a2Q9JLR1 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a2Q9JLR1 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a2Q9JLR1 Unc79-202ENSMUST00000101099 8874 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a2Q9JLR1 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a2Q9JLR1 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.41□□□□□ -0.74
Sec61a2Q9JLR1 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a2Q9JLR1 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a2Q9JLR1 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a2Q9JLR1 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a2Q9JLR1 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.41□□□□□ -0.74
Sec61a2Q9JLR1 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a2Q9JLR1 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC10.41□□□□□ -0.74
Sec61a2Q9JLR1 Gm26286-201ENSMUST00000104166 134 ntBASIC10.41□□□□□ -0.74
Sec61a2Q9JLR1 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a2Q9JLR1 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a2Q9JLR1 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a2Q9JLR1 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a2Q9JLR1 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
Sec61a2Q9JLR1 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC10.41□□□□□ -0.74
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms