Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Gm14058-201ENSMUST00000116082 735 ntBASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Gm9062-201ENSMUST00000117712 727 ntBASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Gm15515-201ENSMUST00000117827 822 ntBASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Gm14396-201ENSMUST00000126966 548 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Gm1667-201ENSMUST00000151651 558 ntTSL 3 BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Arid3b-204ENSMUST00000164010 1259 ntTSL 5 BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Prox2os-201ENSMUST00000177043 1133 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Gm29087-201ENSMUST00000186462 645 ntTSL 5 BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Gm44100-201ENSMUST00000204329 436 ntBASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Olfr1347-205ENSMUST00000220413 964 ntBASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Net1-206ENSMUST00000222504 447 ntTSL 3 BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Mill2-201ENSMUST00000072386 1121 ntAPPRIS P4 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Tead3-207ENSMUST00000219703 1320 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 AC154537.1-201ENSMUST00000226101 1304 ntBASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Nr1i3-202ENSMUST00000075469 1305 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Gm38089-201ENSMUST00000193585 1514 ntBASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Rab19-201ENSMUST00000031986 1575 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Slc6a12-205ENSMUST00000166457 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Olfr56-203ENSMUST00000179282 1935 ntTSL 5 BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 AC159308.2-201ENSMUST00000213592 2325 ntBASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Kcnj11-205ENSMUST00000211674 3142 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Tubb3Q9ERD7 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Camsap3-209ENSMUST00000207970 3817 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Prkcd-205ENSMUST00000112207 2139 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 H2afv-202ENSMUST00000109737 1633 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 AC163354.1-205ENSMUST00000223262 1511 ntTSL 5 BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Gm23596-201ENSMUST00000104304 132 ntBASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Gm13035-201ENSMUST00000117496 342 ntBASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Gm13611-201ENSMUST00000118269 318 ntBASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 9330159M07Rik-202ENSMUST00000180783 1044 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Gm4157-201ENSMUST00000211647 679 ntBASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Gm5369-201ENSMUST00000217499 588 ntBASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Gm807-202ENSMUST00000224929 408 ntBASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Gm26448-201ENSMUST00000082446 203 ntBASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Gm21811-201ENSMUST00000096485 930 ntBASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Tubb3Q9ERD7 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tubb3Q9ERD7 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tubb3Q9ERD7 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tubb3Q9ERD7 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Tubb3Q9ERD7 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tubb3Q9ERD7 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tubb3Q9ERD7 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Tubb3Q9ERD7 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC11.46□□□□□ -0.57
Tubb3Q9ERD7 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms