Protein–RNA interactions for Protein: Q9EQM3

Nkx2-4, Homeobox protein Nkx-2.4, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-4Q9EQM3 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Gm6641-201ENSMUST00000196100 1315 ntBASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC11.85□□□□□ -0.51
Nkx2-4Q9EQM3 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Pmp22-204ENSMUST00000108702 1822 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Eif1a-201ENSMUST00000078079 2879 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Gm23595-201ENSMUST00000104306 130 ntBASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Gm12418-201ENSMUST00000118116 942 ntBASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Mia-202ENSMUST00000121848 572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Mid1-ps1-201ENSMUST00000167967 1248 ntBASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Gm21778-201ENSMUST00000178779 471 ntBASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Gm2345-201ENSMUST00000193451 589 ntBASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Gm42751-201ENSMUST00000198065 559 ntBASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Gm45641-201ENSMUST00000209775 452 ntTSL 5 BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Pigx-212ENSMUST00000215073 765 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 AC170597.1-201ENSMUST00000221956 440 ntTSL 2 BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 AC156790.2-201ENSMUST00000227115 568 ntBASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Hax1-201ENSMUST00000079724 1139 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 H2-Q1-202ENSMUST00000105041 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Cdc7-201ENSMUST00000031221 2961 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC11.84□□□□□ -0.51
Nkx2-4Q9EQM3 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Nkx2-4Q9EQM3 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Nkx2-4Q9EQM3 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.51
Nkx2-4Q9EQM3 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Nkx2-4Q9EQM3 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Nkx2-4Q9EQM3 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Gm42928-201ENSMUST00000197338 3339 ntBASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Rassf8-201ENSMUST00000032388 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 B230398E01Rik-201ENSMUST00000125186 1958 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 AC107763.1-201ENSMUST00000226082 1365 ntBASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 4931415C17Rik-202ENSMUST00000131064 2255 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 AC165351.1-201ENSMUST00000219078 2020 ntBASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Mtf2-201ENSMUST00000081567 4060 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Atp5g3-202ENSMUST00000111996 723 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 H2afb3-201ENSMUST00000122050 348 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 1110036E04Rik-201ENSMUST00000181151 777 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Ighv1-86-201ENSMUST00000200562 353 ntBASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Gm9102-201ENSMUST00000219250 465 ntBASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 CT025603.1-201ENSMUST00000224040 448 ntBASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Tcl1b5-201ENSMUST00000000717 1055 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Gm6564-201ENSMUST00000075377 619 ntBASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Taar7a-201ENSMUST00000078532 1077 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Taar7b-201ENSMUST00000092658 1077 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Olfr1313-201ENSMUST00000099599 938 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Nkx2-4Q9EQM3 Prkag3-206ENSMUST00000188073 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms