Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Clcc1-202ENSMUST00000106609 2043 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Gm11560-201ENSMUST00000117567 948 ntBASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Gm14395-201ENSMUST00000120494 563 ntBASIC11.32□□□□□ -0.6
Rrp8Q9DB85 C1qtnf7-202ENSMUST00000121872 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Fam187b-203ENSMUST00000129773 1213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Gm20392-201ENSMUST00000173047 701 ntBASIC11.32□□□□□ -0.6
Rrp8Q9DB85 1110059E24Rik-205ENSMUST00000178523 629 ntTSL 3 BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 2700099C18Rik-202ENSMUST00000182402 1275 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Cd1d2-202ENSMUST00000192481 1131 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Gm37638-201ENSMUST00000194337 1123 ntBASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Gm43671-201ENSMUST00000200422 433 ntBASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Gm17825-201ENSMUST00000206836 794 ntBASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Gm7082-201ENSMUST00000209880 969 ntBASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Gm4811-201ENSMUST00000220879 1220 ntBASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Gm6722-201ENSMUST00000221586 390 ntBASIC11.32□□□□□ -0.6
Rrp8Q9DB85 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Sod2-201ENSMUST00000007012 3824 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Bms1-201ENSMUST00000032237 4345 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Gm18294-201ENSMUST00000176980 1748 ntBASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Mrvi1-202ENSMUST00000125758 5953 ntAPPRIS ALT2 TSL 2 BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Rrp8Q9DB85 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Camk2g-203ENSMUST00000100837 3564 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Spryd7-201ENSMUST00000022497 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Mei4-201ENSMUST00000057067 2670 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Gm8723-201ENSMUST00000166076 820 ntBASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Gm8701-201ENSMUST00000169259 874 ntBASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Gm7902-201ENSMUST00000198842 947 ntBASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Gm42655-201ENSMUST00000202782 1134 ntBASIC11.31□□□□□ -0.6
Rrp8Q9DB85 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Gm44056-201ENSMUST00000204623 1427 ntBASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Gm8899-201ENSMUST00000214635 1332 ntBASIC11.31□□□□□ -0.6
Rrp8Q9DB85 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Rrp8Q9DB85 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rrp8Q9DB85 Ptprm-203ENSMUST00000224091 3773 ntBASIC11.3□□□□□ -0.6
Rrp8Q9DB85 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rrp8Q9DB85 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Rrp8Q9DB85 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Rrp8Q9DB85 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms