Protein–RNA interactions for Protein: Q9D7F7

Chmp4c, Charged multivesicular body protein 4c, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp4cQ9D7F7 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp4cQ9D7F7 AC122291.1-201ENSMUST00000228937 5748 ntBASIC13.79□□□□□ -0.2
Chmp4cQ9D7F7 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Chmp4cQ9D7F7 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Chmp4cQ9D7F7 Gm7003-201ENSMUST00000195089 312 ntBASIC13.79□□□□□ -0.2
Chmp4cQ9D7F7 Gm38314-201ENSMUST00000195709 625 ntBASIC13.79□□□□□ -0.2
Chmp4cQ9D7F7 Gm43002-201ENSMUST00000200310 155 ntBASIC13.79□□□□□ -0.2
Chmp4cQ9D7F7 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp4cQ9D7F7 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp4cQ9D7F7 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp4cQ9D7F7 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp4cQ9D7F7 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp4cQ9D7F7 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp4cQ9D7F7 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp4cQ9D7F7 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp4cQ9D7F7 Ctcfl-202ENSMUST00000179693 3174 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Chmp4cQ9D7F7 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Chmp4cQ9D7F7 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Chmp4cQ9D7F7 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp4cQ9D7F7 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp4cQ9D7F7 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp4cQ9D7F7 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC13.78□□□□□ -0.2
Chmp4cQ9D7F7 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC13.78□□□□□ -0.2
Chmp4cQ9D7F7 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC13.78□□□□□ -0.2
Chmp4cQ9D7F7 Gm26286-201ENSMUST00000104166 134 ntBASIC13.78□□□□□ -0.2
Chmp4cQ9D7F7 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Chmp4cQ9D7F7 Gm27320-201ENSMUST00000184892 109 ntBASIC13.78□□□□□ -0.2
Chmp4cQ9D7F7 Gm38228-201ENSMUST00000193169 1293 ntBASIC13.78□□□□□ -0.2
Chmp4cQ9D7F7 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp4cQ9D7F7 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Chmp4cQ9D7F7 Olfr1415-203ENSMUST00000204766 403 ntTSL 3 BASIC13.78□□□□□ -0.2
Chmp4cQ9D7F7 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.78□□□□□ -0.2
Chmp4cQ9D7F7 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp4cQ9D7F7 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp4cQ9D7F7 4833420G17Rik-204ENSMUST00000225186 2627 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Chmp4cQ9D7F7 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Chmp4cQ9D7F7 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp4cQ9D7F7 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC13.78□□□□□ -0.2
Chmp4cQ9D7F7 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp4cQ9D7F7 Rgr-203ENSMUST00000225070 4704 ntBASIC13.78□□□□□ -0.2
Chmp4cQ9D7F7 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Chmp4cQ9D7F7 Efna1-202ENSMUST00000118587 1632 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp4cQ9D7F7 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp4cQ9D7F7 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp4cQ9D7F7 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp4cQ9D7F7 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp4cQ9D7F7 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp4cQ9D7F7 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp4cQ9D7F7 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Chmp4cQ9D7F7 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp4cQ9D7F7 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Chmp4cQ9D7F7 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Chmp4cQ9D7F7 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Chmp4cQ9D7F7 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.2
Chmp4cQ9D7F7 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Chmp4cQ9D7F7 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.2
Chmp4cQ9D7F7 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC13.77□□□□□ -0.2
Chmp4cQ9D7F7 Tax1bp3-202ENSMUST00000108477 1153 ntTSL 5 BASIC13.77□□□□□ -0.21
Chmp4cQ9D7F7 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4cQ9D7F7 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Chmp4cQ9D7F7 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4cQ9D7F7 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4cQ9D7F7 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4cQ9D7F7 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4cQ9D7F7 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4cQ9D7F7 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4cQ9D7F7 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC13.77□□□□□ -0.21
Chmp4cQ9D7F7 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4cQ9D7F7 Gm25890-201ENSMUST00000177643 165 ntBASIC13.77□□□□□ -0.21
Chmp4cQ9D7F7 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.77□□□□□ -0.21
Chmp4cQ9D7F7 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.77□□□□□ -0.21
Chmp4cQ9D7F7 Gm22614-201ENSMUST00000178300 165 ntBASIC13.77□□□□□ -0.21
Chmp4cQ9D7F7 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Chmp4cQ9D7F7 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4cQ9D7F7 Gm13097-201ENSMUST00000210722 397 ntBASIC13.77□□□□□ -0.21
Chmp4cQ9D7F7 Gm17827-201ENSMUST00000211825 742 ntBASIC13.77□□□□□ -0.21
Chmp4cQ9D7F7 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Chmp4cQ9D7F7 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC13.77□□□□□ -0.21
Chmp4cQ9D7F7 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4cQ9D7F7 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4cQ9D7F7 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4cQ9D7F7 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4cQ9D7F7 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4cQ9D7F7 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4cQ9D7F7 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4cQ9D7F7 Gm22042-201ENSMUST00000082989 165 ntBASIC13.77□□□□□ -0.21
Chmp4cQ9D7F7 Gm26110-201ENSMUST00000083971 165 ntBASIC13.77□□□□□ -0.21
Chmp4cQ9D7F7 Hnrnpa2b1-202ENSMUST00000090002 1662 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
Chmp4cQ9D7F7 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4cQ9D7F7 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4cQ9D7F7 Ntrk2-201ENSMUST00000079828 8744 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4cQ9D7F7 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4cQ9D7F7 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Chmp4cQ9D7F7 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Slc7a7-201ENSMUST00000000984 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Kif1a-203ENSMUST00000171556 5391 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Chmp4cQ9D7F7 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms