Protein–RNA interactions for Protein: Q9D554

Sf3a3, Splicing factor 3A subunit 3, mousemouse

Known RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a3Q9D554 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3a3Q9D554 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3a3Q9D554 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Lnx2-201ENSMUST00000016664 4557 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Tmx2-203ENSMUST00000111665 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Rnf144b-201ENSMUST00000068891 4640 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Mypn-201ENSMUST00000095580 5246 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Sf3a3Q9D554 Gm8793-201ENSMUST00000183069 1303 ntBASIC11.6□□□□□ -0.55
Sf3a3Q9D554 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3a3Q9D554 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC11.6□□□□□ -0.55
Sf3a3Q9D554 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3a3Q9D554 Fbxl5-202ENSMUST00000087465 4237 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3a3Q9D554 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3a3Q9D554 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC11.6□□□□□ -0.55
Sf3a3Q9D554 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3a3Q9D554 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3a3Q9D554 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.6□□□□□ -0.55
Sf3a3Q9D554 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Sf3a3Q9D554 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3a3Q9D554 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3a3Q9D554 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3a3Q9D554 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3a3Q9D554 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3a3Q9D554 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Sf3a3Q9D554 Gm9908-201ENSMUST00000211534 448 ntBASIC11.6□□□□□ -0.55
Sf3a3Q9D554 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3a3Q9D554 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Sf3a3Q9D554 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3a3Q9D554 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3a3Q9D554 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Sf3a3Q9D554 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3a3Q9D554 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Sf3a3Q9D554 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3a3Q9D554 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3a3Q9D554 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3a3Q9D554 Atg16l2-201ENSMUST00000120267 6459 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3a3Q9D554 Nrg1-213ENSMUST00000208617 2787 ntTSL 5 BASIC11.6□□□□□ -0.55
Sf3a3Q9D554 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3a3Q9D554 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3a3Q9D554 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.6□□□□□ -0.55
Sf3a3Q9D554 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3a3Q9D554 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3a3Q9D554 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3a3Q9D554 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Sf3a3Q9D554 Rbm8a-202ENSMUST00000196456 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3a3Q9D554 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3a3Q9D554 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3a3Q9D554 Chst15-202ENSMUST00000080215 4813 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3a3Q9D554 Cdh1-203ENSMUST00000167688 3203 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Sf3a3Q9D554 Irf9-202ENSMUST00000130697 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3a3Q9D554 Pa2g4-202ENSMUST00000131728 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3a3Q9D554 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Sf3a3Q9D554 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Sf3a3Q9D554 Sf3b5-201ENSMUST00000105139 3841 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Sf3a3Q9D554 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3a3Q9D554 Gm24644-201ENSMUST00000157114 139 ntBASIC11.59□□□□□ -0.55
Sf3a3Q9D554 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Sf3a3Q9D554 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC11.59□□□□□ -0.55
Sf3a3Q9D554 Gm18711-201ENSMUST00000199341 750 ntBASIC11.59□□□□□ -0.55
Sf3a3Q9D554 Gm18584-201ENSMUST00000203098 964 ntBASIC11.59□□□□□ -0.55
Sf3a3Q9D554 Gm44711-201ENSMUST00000205414 1264 ntBASIC11.59□□□□□ -0.55
Sf3a3Q9D554 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Sf3a3Q9D554 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Sf3a3Q9D554 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.59□□□□□ -0.55
Sf3a3Q9D554 CT030657.3-201ENSMUST00000222707 1200 ntBASIC11.59□□□□□ -0.55
Sf3a3Q9D554 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3a3Q9D554 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3a3Q9D554 Usmg5-201ENSMUST00000096014 341 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3a3Q9D554 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Sf3a3Q9D554 Mapre2-203ENSMUST00000118826 3052 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3a3Q9D554 AC129336.2-201ENSMUST00000218053 3086 ntBASIC11.59□□□□□ -0.55
Sf3a3Q9D554 Gm2673-201ENSMUST00000120958 1608 ntBASIC11.59□□□□□ -0.55
Sf3a3Q9D554 Tbc1d31-201ENSMUST00000022992 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3a3Q9D554 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3a3Q9D554 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3a3Q9D554 Zfp956-201ENSMUST00000101445 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3a3Q9D554 Pnma2-201ENSMUST00000089236 5518 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3a3Q9D554 Alg12-204ENSMUST00000162183 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3a3Q9D554 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.59□□□□□ -0.55
Sf3a3Q9D554 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Sf3a3Q9D554 AC158779.1-201ENSMUST00000228912 3861 ntBASIC11.59□□□□□ -0.55
Sf3a3Q9D554 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Sf3a3Q9D554 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Sf3a3Q9D554 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Sf3a3Q9D554 2010111I01Rik-201ENSMUST00000021911 2979 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.55
Sf3a3Q9D554 Pdcd1-201ENSMUST00000027507 1930 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Sf3a3Q9D554 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Sf3a3Q9D554 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Sf3a3Q9D554 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Sf3a3Q9D554 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC11.58□□□□□ -0.56
Sf3a3Q9D554 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.58□□□□□ -0.56
Sf3a3Q9D554 Epb41l5-202ENSMUST00000052404 6442 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms