Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Synpo2l-201ENSMUST00000057090 4394 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Ing1-204ENSMUST00000210041 1881 ntTSL 5 BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Mob3a-201ENSMUST00000003438 2682 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Gm7538-201ENSMUST00000200918 1348 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Gm9519-201ENSMUST00000206108 1337 ntBASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Cfap52-201ENSMUST00000021287 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Myo5a-206ENSMUST00000136731 6480 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Cdc45-202ENSMUST00000096990 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Gm14285-201ENSMUST00000146049 380 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Gm46400-201ENSMUST00000222294 724 ntTSL 5 BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Mcpt1-201ENSMUST00000022836 1014 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Gm37600-201ENSMUST00000193764 3292 ntBASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Pml-207ENSMUST00000135310 4413 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Gm19221-201ENSMUST00000221827 1477 ntBASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trim13Q9CYB0 Gm43154-214ENSMUST00000211225 1420 ntTSL 5 BASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Scaf1-201ENSMUST00000085383 4293 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Hnrnph2-203ENSMUST00000074950 2426 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim13Q9CYB0 4930554G24Rik-201ENSMUST00000126260 1603 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Gm7722-201ENSMUST00000120646 741 ntBASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Gm11658-201ENSMUST00000120913 1008 ntBASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Gm11960-201ENSMUST00000122068 925 ntBASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Gm8062-201ENSMUST00000139696 444 ntBASIC10.67□□□□□ -0.7
Trim13Q9CYB0 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Gm2467-201ENSMUST00000182266 1010 ntBASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Gm6981-201ENSMUST00000182467 1008 ntBASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Gsdmcl-ps-204ENSMUST00000191285 637 ntTSL 3 BASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Gm42627-201ENSMUST00000197347 224 ntBASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Gm10254-201ENSMUST00000052888 867 ntBASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Lig1-211ENSMUST00000177588 3174 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Wdr43-201ENSMUST00000047086 3450 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Gm19040-201ENSMUST00000203280 4726 ntBASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trim13Q9CYB0 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms