Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Gm14660-201ENSMUST00000119809 575 ntBASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Cdc7-204ENSMUST00000118261 3129 ntAPPRIS P3 TSL 1 (best) BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Mgat5-201ENSMUST00000038361 8436 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC10.4□□□□□ -0.74
Krt88Q9CPR6 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC10.4□□□□□ -0.75
Krt88Q9CPR6 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC10.4□□□□□ -0.75
Krt88Q9CPR6 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Krt88Q9CPR6 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.4□□□□□ -0.75
Krt88Q9CPR6 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.75
Krt88Q9CPR6 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Cnpy2-202ENSMUST00000219037 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 AC091458.1-201ENSMUST00000220902 1361 ntBASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Sirt2-209ENSMUST00000170068 1585 ntTSL 5 BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 AC207128.2-201ENSMUST00000223708 1924 ntBASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Srfbp1-201ENSMUST00000025406 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Gm6548-201ENSMUST00000167498 1165 ntBASIC10.39□□□□□ -0.75
Krt88Q9CPR6 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Gm9034-201ENSMUST00000182071 1005 ntBASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Gm19963-201ENSMUST00000208413 1255 ntBASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Dpysl4-201ENSMUST00000026551 3552 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Cacna2d4-201ENSMUST00000037434 5803 ntAPPRIS P3 TSL 2 BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Pde4c-201ENSMUST00000034307 3203 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Pcdha6-201ENSMUST00000193389 4653 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 Camta2-201ENSMUST00000036299 4495 ntAPPRIS P3 TSL 1 (best) BASIC10.39□□□□□ -0.75
Krt88Q9CPR6 AC154404.1-201ENSMUST00000223601 2077 ntBASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Csnk1a1-204ENSMUST00000165123 4083 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Cd6-202ENSMUST00000039043 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Armc1-201ENSMUST00000029125 3673 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Mab21l1-201ENSMUST00000075422 2492 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Gm11989-201ENSMUST00000117240 672 ntBASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Gm11362-201ENSMUST00000118838 850 ntBASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Pdxk-ps-202ENSMUST00000160550 876 ntBASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Krt88Q9CPR6 CT571245.2-201ENSMUST00000218421 305 ntBASIC10.38□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms