Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trim11Q99PQ2 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Dixdc1-203ENSMUST00000117646 5719 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Cad-203ENSMUST00000200953 6489 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Tcea3-201ENSMUST00000102533 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Gm12196-201ENSMUST00000120954 262 ntBASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Gm18730-201ENSMUST00000218038 343 ntBASIC13.15□□□□□ -0.3
Trim11Q99PQ2 AC151275.1-201ENSMUST00000224870 585 ntBASIC13.15□□□□□ -0.3
Trim11Q99PQ2 AC133602.1-201ENSMUST00000227510 509 ntBASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 AC154404.1-201ENSMUST00000223601 2077 ntBASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Npy5r-203ENSMUST00000212563 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Gm37122-201ENSMUST00000195313 1567 ntBASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Tpra1-219ENSMUST00000203345 3359 ntTSL 5 BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Fbxl12os-203ENSMUST00000138471 2127 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trim11Q99PQ2 Gm9129-201ENSMUST00000218173 1689 ntBASIC13.15□□□□□ -0.31
Trim11Q99PQ2 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Kalrn-207ENSMUST00000114960 6452 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim11Q99PQ2 CT010447.1-201ENSMUST00000225657 1608 ntBASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Gm16505-201ENSMUST00000179981 232 ntBASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Gm29164-201ENSMUST00000185454 1024 ntBASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Gm2965-201ENSMUST00000198365 343 ntBASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Gm45575-201ENSMUST00000210283 548 ntBASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Gm6560-201ENSMUST00000198588 1591 ntBASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim11Q99PQ2 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Nelfcd-201ENSMUST00000016397 2280 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Sh3kbp1-201ENSMUST00000073094 2280 ntTSL 5 BASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Dna2-203ENSMUST00000131422 4122 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Gm43963-201ENSMUST00000203466 2488 ntBASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Trim11Q99PQ2 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms