Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Zfp46-201ENSMUST00000069195 4639 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Gm43807-201ENSMUST00000200678 1781 ntBASIC11.59□□□□□ -0.55
Trim33Q99PP7 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trim33Q99PP7 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trim33Q99PP7 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Trim33Q99PP7 Surf6-201ENSMUST00000047632 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trim33Q99PP7 Kcna1-201ENSMUST00000055168 4031 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trim33Q99PP7 Med1-202ENSMUST00000092735 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trim33Q99PP7 Abca3-202ENSMUST00000079594 6380 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim33Q99PP7 AC093022.4-203ENSMUST00000228523 2657 ntBASIC11.58□□□□□ -0.56
Trim33Q99PP7 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Mmel1-204ENSMUST00000105635 2592 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Jak3-201ENSMUST00000051995 4019 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Abcc10-204ENSMUST00000167360 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Olfm4-201ENSMUST00000088735 1640 ntTSL 2 BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Jaml-201ENSMUST00000050020 2461 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Pde1c-201ENSMUST00000044505 3907 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Palld-202ENSMUST00000121200 4193 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Trim33Q99PP7 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.58□□□□□ -0.56
Trim33Q99PP7 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.58□□□□□ -0.56
Trim33Q99PP7 Gm14441-201ENSMUST00000121960 540 ntBASIC11.58□□□□□ -0.56
Trim33Q99PP7 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Gm26782-202ENSMUST00000181697 971 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Gm9034-201ENSMUST00000182071 1005 ntBASIC11.58□□□□□ -0.56
Trim33Q99PP7 1700034G24Rik-202ENSMUST00000183186 1081 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Zfp229-206ENSMUST00000183192 653 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC11.58□□□□□ -0.56
Trim33Q99PP7 Cdc34-208ENSMUST00000219791 799 ntTSL 3 BASIC11.58□□□□□ -0.56
Trim33Q99PP7 AC159747.1-201ENSMUST00000219903 265 ntBASIC11.58□□□□□ -0.56
Trim33Q99PP7 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim33Q99PP7 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Gm9072-201ENSMUST00000218390 1514 ntBASIC11.58□□□□□ -0.56
Trim33Q99PP7 Akap12-201ENSMUST00000045730 6195 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trim33Q99PP7 CU062626.3-201ENSMUST00000225522 1411 ntBASIC11.58□□□□□ -0.56
Trim33Q99PP7 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Phkg2-201ENSMUST00000033086 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Clec4d-201ENSMUST00000032240 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trim33Q99PP7 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim33Q99PP7 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.57□□□□□ -0.56
Trim33Q99PP7 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Abi1-211ENSMUST00000149719 3303 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim33Q99PP7 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Tbx10-201ENSMUST00000041871 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Dcaf17-209ENSMUST00000154704 7739 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Npr2-201ENSMUST00000030191 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Ighv2-6-8-201ENSMUST00000103455 342 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Trav13d-4-201ENSMUST00000103607 264 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Gm23596-201ENSMUST00000104304 132 ntBASIC11.57□□□□□ -0.56
Trim33Q99PP7 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.57□□□□□ -0.56
Trim33Q99PP7 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC11.57□□□□□ -0.56
Trim33Q99PP7 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Gm9192-201ENSMUST00000183221 985 ntBASIC11.57□□□□□ -0.56
Trim33Q99PP7 Trav13-4-dv7-202ENSMUST00000184905 264 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trim33Q99PP7 Gm28450-201ENSMUST00000187349 638 ntBASIC11.57□□□□□ -0.56
Trim33Q99PP7 Gm38188-201ENSMUST00000192879 856 ntBASIC11.57□□□□□ -0.56
Trim33Q99PP7 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms