Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Pcdh15Q99PJ1 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pcdh15Q99PJ1 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh15Q99PJ1 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Pcdh15Q99PJ1 Smok2b-201ENSMUST00000059824 1584 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Pcdh15Q99PJ1 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh15Q99PJ1 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh15Q99PJ1 Wfdc2-203ENSMUST00000109345 558 ntAPPRIS ALT2 TSL 3 BASIC12.75□□□□□ -0.37
Pcdh15Q99PJ1 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh15Q99PJ1 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh15Q99PJ1 Gm7805-201ENSMUST00000154348 448 ntBASIC12.75□□□□□ -0.37
Pcdh15Q99PJ1 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh15Q99PJ1 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh15Q99PJ1 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC12.75□□□□□ -0.37
Pcdh15Q99PJ1 Gm3791-201ENSMUST00000220790 768 ntBASIC12.75□□□□□ -0.37
Pcdh15Q99PJ1 Galp-201ENSMUST00000037553 650 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh15Q99PJ1 Gm17541-201ENSMUST00000080062 525 ntBASIC12.75□□□□□ -0.37
Pcdh15Q99PJ1 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh15Q99PJ1 Gm17141-201ENSMUST00000167578 3148 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh15Q99PJ1 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.75□□□□□ -0.37
Pcdh15Q99PJ1 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh15Q99PJ1 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh15Q99PJ1 Fam222b-203ENSMUST00000155571 3358 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh15Q99PJ1 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Pcdh15Q99PJ1 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh15Q99PJ1 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC12.75□□□□□ -0.37
Pcdh15Q99PJ1 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh15Q99PJ1 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Pcdh15Q99PJ1 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh15Q99PJ1 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh15Q99PJ1 Gstm3-201ENSMUST00000004136 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh15Q99PJ1 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh15Q99PJ1 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Pcdh15Q99PJ1 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Pcdh15Q99PJ1 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Pcdh15Q99PJ1 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Gm8876-201ENSMUST00000120768 1122 ntBASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Gm36980-201ENSMUST00000195643 622 ntBASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Gm29328-212ENSMUST00000209182 1168 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Gm32743-201ENSMUST00000214196 594 ntTSL 3 BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 AC133496.1-201ENSMUST00000223891 743 ntBASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Gm22341-201ENSMUST00000083775 129 ntBASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Lin52-201ENSMUST00000137170 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Rbm8a-201ENSMUST00000048915 2608 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Gm12716-201ENSMUST00000120606 1354 ntBASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Gm13777-201ENSMUST00000118208 345 ntBASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Gm12950-201ENSMUST00000121683 417 ntBASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Gm13709-201ENSMUST00000138573 614 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 2210408F21Rik-209ENSMUST00000146778 579 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 2010204K13Rik-203ENSMUST00000150671 885 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Tcl1-203ENSMUST00000175652 535 ntTSL 2 BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Gm26943-201ENSMUST00000182295 957 ntBASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Gm4960-201ENSMUST00000182928 1001 ntBASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Ighv5-12-4-201ENSMUST00000195381 353 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 CT025618.1-201ENSMUST00000227409 1279 ntBASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 AC141884.2-201ENSMUST00000228811 775 ntBASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Fabp1-201ENSMUST00000067492 553 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Srp14-201ENSMUST00000009693 798 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Bet1-201ENSMUST00000049166 1516 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Slc25a25-202ENSMUST00000052119 3529 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Arrb2-201ENSMUST00000079056 1443 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Pcdh15Q99PJ1 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Pcdh15Q99PJ1 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Pcdh15Q99PJ1 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh15Q99PJ1 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Pcdh15Q99PJ1 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms