Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Psen1-201ENSMUST00000041806 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Kpna1-201ENSMUST00000004054 5039 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 AL732309.1-201ENSMUST00000228627 2045 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
Nkx6-1Q99MA9 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 Oasl1-201ENSMUST00000031540 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 Rad51ap1-202ENSMUST00000112221 1871 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 Gm11996-201ENSMUST00000117538 915 ntBASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 Gm11500-201ENSMUST00000118237 601 ntBASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 Gm12791-201ENSMUST00000120788 655 ntBASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 Snrnp25-202ENSMUST00000121182 659 ntAPPRIS ALT2 TSL 3 BASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 Gm26368-201ENSMUST00000157826 118 ntBASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 CT009754.4-201ENSMUST00000221430 565 ntBASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 CT573047.1-201ENSMUST00000223652 851 ntBASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 Gm14005-208ENSMUST00000223654 681 ntBASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 Crygb-201ENSMUST00000027090 634 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 Fam160a2-201ENSMUST00000048079 3443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 Rabepk-207ENSMUST00000145903 2968 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 CT025678.1-201ENSMUST00000214795 2972 ntBASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 5430419D17Rik-201ENSMUST00000050586 2928 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Nkx6-1Q99MA9 Syt7-202ENSMUST00000076968 6624 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Nkx6-1Q99MA9 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Nkx6-1Q99MA9 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC10.9□□□□□ -0.67
Nkx6-1Q99MA9 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Nkx6-1Q99MA9 Ccdc89-201ENSMUST00000061391 2093 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 1520401A03Rik-205ENSMUST00000201734 2660 ntAPPRIS P5 TSL 5 BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 D3Ertd751e-204ENSMUST00000119572 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Vmn1r207-ps-201ENSMUST00000119931 1073 ntBASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Hmgn2-208ENSMUST00000136327 772 ntTSL 2 BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Gm13133-201ENSMUST00000143888 736 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Gm25554-201ENSMUST00000158075 113 ntBASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Gm25677-201ENSMUST00000174983 72 ntBASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Gm17597-201ENSMUST00000181220 1115 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Gm43969-201ENSMUST00000204833 535 ntBASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Gm6855-201ENSMUST00000206307 790 ntBASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Gm29208-205ENSMUST00000214517 1056 ntTSL 5 BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 AC124742.1-201ENSMUST00000219909 547 ntTSL 3 BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Banf2-201ENSMUST00000037722 571 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Gm26632-201ENSMUST00000181120 1400 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 E330034L11Rik-201ENSMUST00000200640 1742 ntBASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Ccdc30-202ENSMUST00000063642 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Gfi1b-201ENSMUST00000028156 1681 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Nkx6-1Q99MA9 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Nkx6-1Q99MA9 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms