Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Gm31938-201ENSMUST00000218081 1818 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Adgb-201ENSMUST00000045328 1893 ntTSL 2 BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Gm6517-201ENSMUST00000121056 511 ntBASIC13.39□□□□□ -0.27
StrcQ8VIM6 Gm12207-201ENSMUST00000143016 494 ntTSL 2 BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Gm26610-201ENSMUST00000181529 1024 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
StrcQ8VIM6 Gm26943-201ENSMUST00000182295 957 ntBASIC13.39□□□□□ -0.27
StrcQ8VIM6 Gm26957-201ENSMUST00000182645 977 ntBASIC13.39□□□□□ -0.27
StrcQ8VIM6 Gm27833-201ENSMUST00000184285 124 ntBASIC13.39□□□□□ -0.27
StrcQ8VIM6 Kif4-ps-202ENSMUST00000185083 652 ntBASIC13.39□□□□□ -0.27
StrcQ8VIM6 Gm8268-201ENSMUST00000209683 458 ntBASIC13.39□□□□□ -0.27
StrcQ8VIM6 1700018G05Rik-201ENSMUST00000211116 386 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
StrcQ8VIM6 AC127583.1-201ENSMUST00000224351 540 ntBASIC13.39□□□□□ -0.27
StrcQ8VIM6 CT025618.1-201ENSMUST00000227409 1279 ntBASIC13.39□□□□□ -0.27
StrcQ8VIM6 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
StrcQ8VIM6 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.38□□□□□ -0.27
StrcQ8VIM6 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
StrcQ8VIM6 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
StrcQ8VIM6 Spef2-203ENSMUST00000159368 1422 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
StrcQ8VIM6 Adgrv1-214ENSMUST00000224088 1492 ntBASIC13.38□□□□□ -0.27
StrcQ8VIM6 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
StrcQ8VIM6 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
StrcQ8VIM6 Hsf2-204ENSMUST00000220042 2430 ntTSL 5 BASIC13.38□□□□□ -0.27
StrcQ8VIM6 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
StrcQ8VIM6 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
StrcQ8VIM6 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
StrcQ8VIM6 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
StrcQ8VIM6 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
StrcQ8VIM6 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC13.38□□□□□ -0.27
StrcQ8VIM6 Ppil2-202ENSMUST00000115719 838 ntTSL 2 BASIC13.38□□□□□ -0.27
StrcQ8VIM6 Gm16480-201ENSMUST00000120439 832 ntBASIC13.38□□□□□ -0.27
StrcQ8VIM6 4930571N24Rik-202ENSMUST00000142914 598 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
StrcQ8VIM6 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC13.38□□□□□ -0.27
StrcQ8VIM6 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
StrcQ8VIM6 6030460B20Rik-201ENSMUST00000191764 1058 ntBASIC13.38□□□□□ -0.27
StrcQ8VIM6 Gm34248-201ENSMUST00000200027 474 ntBASIC13.38□□□□□ -0.27
StrcQ8VIM6 AC140381.2-201ENSMUST00000217935 1260 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
StrcQ8VIM6 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC13.38□□□□□ -0.27
StrcQ8VIM6 Gm8730-201ENSMUST00000076373 954 ntBASIC13.38□□□□□ -0.27
StrcQ8VIM6 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
StrcQ8VIM6 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
StrcQ8VIM6 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
StrcQ8VIM6 Ttc1-201ENSMUST00000048578 1438 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
StrcQ8VIM6 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
StrcQ8VIM6 Gpr19-213ENSMUST00000215088 1484 ntTSL 5 BASIC13.38□□□□□ -0.27
StrcQ8VIM6 4930566F21Rik-201ENSMUST00000201177 1535 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
StrcQ8VIM6 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
StrcQ8VIM6 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
StrcQ8VIM6 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
StrcQ8VIM6 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
StrcQ8VIM6 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
StrcQ8VIM6 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
StrcQ8VIM6 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
StrcQ8VIM6 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
StrcQ8VIM6 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
StrcQ8VIM6 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC13.37□□□□□ -0.27
StrcQ8VIM6 Tnnt3-203ENSMUST00000105941 747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
StrcQ8VIM6 Tnnt3-204ENSMUST00000105942 720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
StrcQ8VIM6 Tnnt3-205ENSMUST00000105943 720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
StrcQ8VIM6 Tnnt3-207ENSMUST00000105945 747 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
StrcQ8VIM6 Tnnt3-208ENSMUST00000105946 765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
StrcQ8VIM6 Gm11235-201ENSMUST00000117763 333 ntBASIC13.37□□□□□ -0.27
StrcQ8VIM6 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC13.37□□□□□ -0.27
StrcQ8VIM6 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
StrcQ8VIM6 Gm4960-201ENSMUST00000182928 1001 ntBASIC13.37□□□□□ -0.27
StrcQ8VIM6 Gm5190-201ENSMUST00000192434 357 ntBASIC13.37□□□□□ -0.27
StrcQ8VIM6 Gm26901-202ENSMUST00000193106 256 ntTSL 3 BASIC13.37□□□□□ -0.27
StrcQ8VIM6 Gm42617-201ENSMUST00000197640 1229 ntBASIC13.37□□□□□ -0.27
StrcQ8VIM6 Gm5311-201ENSMUST00000203518 709 ntBASIC13.37□□□□□ -0.27
StrcQ8VIM6 AC153153.1-201ENSMUST00000225803 793 ntBASIC13.37□□□□□ -0.27
StrcQ8VIM6 AC102327.1-201ENSMUST00000226389 742 ntBASIC13.37□□□□□ -0.27
StrcQ8VIM6 AC118639.1-202ENSMUST00000226957 653 ntBASIC13.37□□□□□ -0.27
StrcQ8VIM6 Gm16477-201ENSMUST00000085365 801 ntBASIC13.37□□□□□ -0.27
StrcQ8VIM6 Gm17415-201ENSMUST00000096427 789 ntBASIC13.37□□□□□ -0.27
StrcQ8VIM6 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
StrcQ8VIM6 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.37□□□□□ -0.27
StrcQ8VIM6 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
StrcQ8VIM6 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
StrcQ8VIM6 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
StrcQ8VIM6 Gm8684-201ENSMUST00000195078 1564 ntBASIC13.37□□□□□ -0.27
StrcQ8VIM6 Krt33b-201ENSMUST00000073890 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
StrcQ8VIM6 Galntl5-201ENSMUST00000030778 1627 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
StrcQ8VIM6 Atxn7l1-203ENSMUST00000110824 1675 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
StrcQ8VIM6 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
StrcQ8VIM6 Myc-204ENSMUST00000160009 1765 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
StrcQ8VIM6 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
StrcQ8VIM6 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
StrcQ8VIM6 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
StrcQ8VIM6 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
StrcQ8VIM6 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
StrcQ8VIM6 Tgfbr1-202ENSMUST00000044234 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
StrcQ8VIM6 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
StrcQ8VIM6 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms