Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp7Q8R1T1 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp7Q8R1T1 Mirt1-202ENSMUST00000180667 1633 ntTSL 5 BASIC14.74□□□□□ -0.05
Chmp7Q8R1T1 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Chmp7Q8R1T1 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Chmp7Q8R1T1 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.74□□□□□ -0.05
Chmp7Q8R1T1 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp7Q8R1T1 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Chmp7Q8R1T1 Gm24791-201ENSMUST00000104284 131 ntBASIC14.74□□□□□ -0.05
Chmp7Q8R1T1 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp7Q8R1T1 Kcnmb4os1-201ENSMUST00000134586 824 ntTSL 2 BASIC14.74□□□□□ -0.05
Chmp7Q8R1T1 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp7Q8R1T1 Gm24992-201ENSMUST00000157412 130 ntBASIC14.74□□□□□ -0.05
Chmp7Q8R1T1 Gm17192-201ENSMUST00000169031 511 ntBASIC14.74□□□□□ -0.05
Chmp7Q8R1T1 Gm19587-201ENSMUST00000191395 545 ntBASIC14.74□□□□□ -0.05
Chmp7Q8R1T1 Gm45856-201ENSMUST00000212752 416 ntBASIC14.74□□□□□ -0.05
Chmp7Q8R1T1 Dydc2-201ENSMUST00000022316 818 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp7Q8R1T1 AC113282.2-201ENSMUST00000224012 945 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Chmp7Q8R1T1 AC113282.3-201ENSMUST00000224757 942 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Chmp7Q8R1T1 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Chmp7Q8R1T1 Dysf-212ENSMUST00000203695 6504 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Chmp7Q8R1T1 Fancc-217ENSMUST00000163091 2995 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Chmp7Q8R1T1 Slc6a13-201ENSMUST00000064580 2234 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp7Q8R1T1 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC14.74□□□□□ -0.05
Chmp7Q8R1T1 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp7Q8R1T1 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp7Q8R1T1 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Chmp7Q8R1T1 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Chmp7Q8R1T1 Alas2-202ENSMUST00000112715 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp7Q8R1T1 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp7Q8R1T1 4931406C07Rik-203ENSMUST00000180339 2756 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Sgpp2-201ENSMUST00000036172 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Shtn1-202ENSMUST00000163821 3767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Gm6322-201ENSMUST00000118789 1004 ntBASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Gm22146-201ENSMUST00000157397 288 ntBASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Hcrtr1-204ENSMUST00000164887 1251 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Gm26982-201ENSMUST00000182250 1151 ntBASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Gm18776-201ENSMUST00000188833 654 ntBASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Use1-201ENSMUST00000019169 854 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Gm6423-201ENSMUST00000204315 934 ntBASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Gm44008-201ENSMUST00000204345 412 ntBASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 AC168279.1-201ENSMUST00000214611 382 ntBASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 CT025602.2-201ENSMUST00000226553 772 ntBASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 2310057N15Rik-201ENSMUST00000054223 1028 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Ralgps2-207ENSMUST00000188656 2481 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Gm44056-201ENSMUST00000204623 1427 ntBASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Jup-201ENSMUST00000001592 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Prpf19-203ENSMUST00000179297 6035 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Airn-205ENSMUST00000161890 1375 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC14.73□□□□□ -0.05
Chmp7Q8R1T1 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp7Q8R1T1 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms