Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clrn1Q8K445 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Clrn1Q8K445 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clrn1Q8K445 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clrn1Q8K445 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clrn1Q8K445 Pkp4-201ENSMUST00000037903 4378 ntTSL 5 BASIC10.88□□□□□ -0.67
Clrn1Q8K445 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.88□□□□□ -0.67
Clrn1Q8K445 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clrn1Q8K445 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC10.88□□□□□ -0.67
Clrn1Q8K445 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clrn1Q8K445 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC10.88□□□□□ -0.67
Clrn1Q8K445 Ndufa3-202ENSMUST00000108644 351 ntTSL 3 BASIC10.88□□□□□ -0.67
Clrn1Q8K445 Gm11500-201ENSMUST00000118237 601 ntBASIC10.88□□□□□ -0.67
Clrn1Q8K445 Gm4909-201ENSMUST00000118749 794 ntBASIC10.88□□□□□ -0.67
Clrn1Q8K445 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Clrn1Q8K445 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC10.88□□□□□ -0.67
Clrn1Q8K445 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC10.88□□□□□ -0.67
Clrn1Q8K445 Gm53-203ENSMUST00000143887 757 ntTSL 3 BASIC10.88□□□□□ -0.67
Clrn1Q8K445 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Clrn1Q8K445 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.88□□□□□ -0.67
Clrn1Q8K445 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC10.88□□□□□ -0.67
Clrn1Q8K445 Rpl31-202ENSMUST00000178079 487 ntAPPRIS P1 TSL 2 BASIC10.88□□□□□ -0.67
Clrn1Q8K445 Gm37246-201ENSMUST00000192665 835 ntBASIC10.88□□□□□ -0.67
Clrn1Q8K445 Gm7848-201ENSMUST00000210739 718 ntBASIC10.88□□□□□ -0.67
Clrn1Q8K445 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.88□□□□□ -0.67
Clrn1Q8K445 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clrn1Q8K445 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clrn1Q8K445 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clrn1Q8K445 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clrn1Q8K445 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clrn1Q8K445 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Clrn1Q8K445 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Clrn1Q8K445 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clrn1Q8K445 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clrn1Q8K445 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clrn1Q8K445 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Clrn1Q8K445 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clrn1Q8K445 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clrn1Q8K445 Gm45776-201ENSMUST00000212366 1522 ntBASIC10.88□□□□□ -0.67
Clrn1Q8K445 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Clrn1Q8K445 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Clrn1Q8K445 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
Clrn1Q8K445 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clrn1Q8K445 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clrn1Q8K445 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clrn1Q8K445 Serpine1-201ENSMUST00000041388 3011 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clrn1Q8K445 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC10.87□□□□□ -0.67
Clrn1Q8K445 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clrn1Q8K445 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Clrn1Q8K445 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clrn1Q8K445 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clrn1Q8K445 Manea-201ENSMUST00000041374 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clrn1Q8K445 Hoxa9-201ENSMUST00000048680 3226 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clrn1Q8K445 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.87□□□□□ -0.67
Clrn1Q8K445 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clrn1Q8K445 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC10.87□□□□□ -0.67
Clrn1Q8K445 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clrn1Q8K445 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC10.87□□□□□ -0.67
Clrn1Q8K445 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.87□□□□□ -0.67
Clrn1Q8K445 Gm14071-201ENSMUST00000117817 509 ntBASIC10.87□□□□□ -0.67
Clrn1Q8K445 Gm12579-201ENSMUST00000118040 783 ntBASIC10.87□□□□□ -0.67
Clrn1Q8K445 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Clrn1Q8K445 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clrn1Q8K445 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC10.87□□□□□ -0.67
Clrn1Q8K445 4930562C15Rik-202ENSMUST00000171105 1299 ntTSL 2 BASIC10.87□□□□□ -0.67
Clrn1Q8K445 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC10.87□□□□□ -0.67
Clrn1Q8K445 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clrn1Q8K445 Gm25732-201ENSMUST00000175168 60 ntBASIC10.87□□□□□ -0.67
Clrn1Q8K445 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC10.87□□□□□ -0.67
Clrn1Q8K445 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC10.87□□□□□ -0.67
Clrn1Q8K445 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clrn1Q8K445 Gm45909-201ENSMUST00000212413 1031 ntBASIC10.87□□□□□ -0.67
Clrn1Q8K445 Gm32352-201ENSMUST00000212465 688 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Clrn1Q8K445 Gm1821-202ENSMUST00000227415 750 ntBASIC10.87□□□□□ -0.67
Clrn1Q8K445 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Clrn1Q8K445 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
Clrn1Q8K445 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clrn1Q8K445 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clrn1Q8K445 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC10.87□□□□□ -0.67
Clrn1Q8K445 C4a-207ENSMUST00000160679 5371 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Clrn1Q8K445 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.87□□□□□ -0.67
Clrn1Q8K445 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Clrn1Q8K445 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clrn1Q8K445 Gm6580-201ENSMUST00000117504 1357 ntBASIC10.87□□□□□ -0.67
Clrn1Q8K445 Poc1a-211ENSMUST00000217213 1398 ntTSL 5 BASIC10.87□□□□□ -0.67
Clrn1Q8K445 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.87□□□□□ -0.67
Clrn1Q8K445 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clrn1Q8K445 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Clrn1Q8K445 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clrn1Q8K445 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Clrn1Q8K445 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Clrn1Q8K445 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clrn1Q8K445 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.86□□□□□ -0.67
Clrn1Q8K445 Nin-201ENSMUST00000021468 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clrn1Q8K445 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clrn1Q8K445 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clrn1Q8K445 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Clrn1Q8K445 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Clrn1Q8K445 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Clrn1Q8K445 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms