Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Igsf9-201ENSMUST00000052629 4133 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Gm44190-201ENSMUST00000205083 1401 ntBASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cchcr1Q8K2I2 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Gm9129-201ENSMUST00000218173 1689 ntBASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Fam172a-201ENSMUST00000091459 3892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Tmcc1-208ENSMUST00000173140 1910 ntTSL 5 BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Gm14724-201ENSMUST00000118400 537 ntBASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Gm12380-201ENSMUST00000119012 544 ntBASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Gm8566-201ENSMUST00000120174 465 ntBASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Gm10807-201ENSMUST00000177134 795 ntBASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Ighv1-62-201ENSMUST00000193406 350 ntBASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Gm21221-201ENSMUST00000202876 1073 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Gm44008-201ENSMUST00000204345 412 ntBASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Gm44262-201ENSMUST00000204969 372 ntBASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 CT485787.1-201ENSMUST00000225617 968 ntBASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Bod1l-204ENSMUST00000202908 10399 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Fut8-203ENSMUST00000177595 2980 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Ctnnal1-201ENSMUST00000045142 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Abi2-207ENSMUST00000188618 4723 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Pla2g16-202ENSMUST00000136465 3048 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Mmp25-201ENSMUST00000024696 3373 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Cdhr4-211ENSMUST00000177173 2480 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cchcr1Q8K2I2 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Cdnf-201ENSMUST00000036350 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Tepp-204ENSMUST00000161029 968 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Rps19-ps9-201ENSMUST00000161787 414 ntBASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Gm7584-201ENSMUST00000175829 940 ntBASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Tfr2-206ENSMUST00000198783 2973 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Gm9678-201ENSMUST00000198979 1149 ntBASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Gm6439-201ENSMUST00000199849 862 ntBASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 1700011D18Rik-201ENSMUST00000205762 277 ntBASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Olfr368-202ENSMUST00000217299 1200 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 AC125350.2-201ENSMUST00000224737 727 ntBASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Gm4978-201ENSMUST00000071565 801 ntBASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Brd3-201ENSMUST00000028282 5419 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Pnmal2-201ENSMUST00000094807 4147 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Poldip3-201ENSMUST00000058793 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cchcr1Q8K2I2 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms