Protein–RNA interactions for Protein: Q8CG80

Shf, SH2 domain-containing adapter protein F, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShfQ8CG80 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.28□□□□□ -0.76
ShfQ8CG80 Gm270-201ENSMUST00000223010 976 ntBASIC10.28□□□□□ -0.76
ShfQ8CG80 Zfp706-203ENSMUST00000226453 517 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
ShfQ8CG80 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
ShfQ8CG80 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
ShfQ8CG80 Gm26448-201ENSMUST00000082446 203 ntBASIC10.28□□□□□ -0.76
ShfQ8CG80 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
ShfQ8CG80 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
ShfQ8CG80 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
ShfQ8CG80 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
ShfQ8CG80 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
ShfQ8CG80 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC10.28□□□□□ -0.76
ShfQ8CG80 Ftsj1-201ENSMUST00000033513 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
ShfQ8CG80 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
ShfQ8CG80 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
ShfQ8CG80 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC10.28□□□□□ -0.76
ShfQ8CG80 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
ShfQ8CG80 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.28□□□□□ -0.76
ShfQ8CG80 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC10.28□□□□□ -0.76
ShfQ8CG80 Cd55b-201ENSMUST00000112488 1325 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
ShfQ8CG80 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
ShfQ8CG80 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
ShfQ8CG80 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
ShfQ8CG80 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC10.28□□□□□ -0.76
ShfQ8CG80 Gm29358-202ENSMUST00000187941 3227 ntBASIC10.28□□□□□ -0.76
ShfQ8CG80 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
ShfQ8CG80 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
ShfQ8CG80 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
ShfQ8CG80 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
ShfQ8CG80 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
ShfQ8CG80 Gm38115-201ENSMUST00000194317 2413 ntTSL 5 BASIC10.27□□□□□ -0.76
ShfQ8CG80 Foxn2-201ENSMUST00000112238 5085 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
ShfQ8CG80 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
ShfQ8CG80 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
ShfQ8CG80 Chd5-201ENSMUST00000005175 9122 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
ShfQ8CG80 Nhlh2-201ENSMUST00000066187 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
ShfQ8CG80 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
ShfQ8CG80 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
ShfQ8CG80 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
ShfQ8CG80 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.27□□□□□ -0.77
ShfQ8CG80 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
ShfQ8CG80 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
ShfQ8CG80 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
ShfQ8CG80 Gm14190-201ENSMUST00000105073 153 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
ShfQ8CG80 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.27□□□□□ -0.77
ShfQ8CG80 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC10.27□□□□□ -0.77
ShfQ8CG80 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
ShfQ8CG80 Gm10807-201ENSMUST00000177134 795 ntBASIC10.27□□□□□ -0.77
ShfQ8CG80 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
ShfQ8CG80 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC10.27□□□□□ -0.77
ShfQ8CG80 Ighv5-7-201ENSMUST00000192302 244 ntBASIC10.27□□□□□ -0.77
ShfQ8CG80 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC10.27□□□□□ -0.77
ShfQ8CG80 Gm36756-203ENSMUST00000223029 1166 ntTSL 5 BASIC10.27□□□□□ -0.77
ShfQ8CG80 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
ShfQ8CG80 Npff-201ENSMUST00000023814 540 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
ShfQ8CG80 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
ShfQ8CG80 Gm4978-201ENSMUST00000071565 801 ntBASIC10.27□□□□□ -0.77
ShfQ8CG80 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC10.27□□□□□ -0.77
ShfQ8CG80 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC10.27□□□□□ -0.77
ShfQ8CG80 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
ShfQ8CG80 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
ShfQ8CG80 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
ShfQ8CG80 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
ShfQ8CG80 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
ShfQ8CG80 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC10.27□□□□□ -0.77
ShfQ8CG80 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
ShfQ8CG80 Kirrel2-201ENSMUST00000045817 3352 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
ShfQ8CG80 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
ShfQ8CG80 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
ShfQ8CG80 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
ShfQ8CG80 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
ShfQ8CG80 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
ShfQ8CG80 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
ShfQ8CG80 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.26□□□□□ -0.77
ShfQ8CG80 Olfr156-203ENSMUST00000214843 1559 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
ShfQ8CG80 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC10.26□□□□□ -0.77
ShfQ8CG80 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC10.26□□□□□ -0.77
ShfQ8CG80 Ckap2-201ENSMUST00000046916 2593 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
ShfQ8CG80 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
ShfQ8CG80 Tmem246-201ENSMUST00000042750 2989 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
ShfQ8CG80 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.26□□□□□ -0.77
ShfQ8CG80 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
ShfQ8CG80 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
ShfQ8CG80 Traf3ip3-212ENSMUST00000192020 1854 ntAPPRIS P2 TSL 5 BASIC10.26□□□□□ -0.77
ShfQ8CG80 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
ShfQ8CG80 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
ShfQ8CG80 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
ShfQ8CG80 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
ShfQ8CG80 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
ShfQ8CG80 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
ShfQ8CG80 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC10.26□□□□□ -0.77
ShfQ8CG80 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
ShfQ8CG80 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
ShfQ8CG80 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC10.26□□□□□ -0.77
ShfQ8CG80 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC10.26□□□□□ -0.77
ShfQ8CG80 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC10.26□□□□□ -0.77
ShfQ8CG80 Gm20495-201ENSMUST00000173902 235 ntBASIC10.26□□□□□ -0.77
ShfQ8CG80 Rpl41-206ENSMUST00000177163 544 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
ShfQ8CG80 Gm25700-201ENSMUST00000177693 110 ntBASIC10.26□□□□□ -0.77
ShfQ8CG80 Mir7677-201ENSMUST00000184226 67 ntBASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 71.4 ms