Protein–RNA interactions for Protein: Q8CG50

Rab43, Ras-related protein Rab-43, mousemouse

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab43Q8CG50 Krit1-201ENSMUST00000080085 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Myo18b-201ENSMUST00000086617 8280 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Gjd4-201ENSMUST00000041007 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Jade2-203ENSMUST00000109091 6099 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Myo5b-203ENSMUST00000121875 6065 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Gm13600-201ENSMUST00000117949 744 ntBASIC11.29□□□□□ -0.6
Rab43Q8CG50 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Gm12030-201ENSMUST00000121917 223 ntBASIC11.29□□□□□ -0.6
Rab43Q8CG50 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Gng8-202ENSMUST00000205459 522 ntAPPRIS P1 TSL 3 BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Gm8436-201ENSMUST00000210152 1080 ntBASIC11.29□□□□□ -0.6
Rab43Q8CG50 Gm5749-201ENSMUST00000210673 1090 ntBASIC11.29□□□□□ -0.6
Rab43Q8CG50 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC11.29□□□□□ -0.6
Rab43Q8CG50 AC129308.3-201ENSMUST00000225652 524 ntBASIC11.29□□□□□ -0.6
Rab43Q8CG50 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab43Q8CG50 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab43Q8CG50 A530032D15Rik-201ENSMUST00000160792 1492 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Lclat1-201ENSMUST00000067545 4467 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Frmd8-201ENSMUST00000025728 4504 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab43Q8CG50 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Fxr1-204ENSMUST00000197694 2129 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Rab43Q8CG50 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab43Q8CG50 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Rab43Q8CG50 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab43Q8CG50 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC11.28□□□□□ -0.6
Rab43Q8CG50 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Rab43Q8CG50 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab43Q8CG50 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rab43Q8CG50 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rab43Q8CG50 Nrxn1-215ENSMUST00000173917 1439 ntTSL 2 BASIC11.28□□□□□ -0.6
Rab43Q8CG50 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab43Q8CG50 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab43Q8CG50 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Rab43Q8CG50 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rab43Q8CG50 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab43Q8CG50 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rab43Q8CG50 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab43Q8CG50 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab43Q8CG50 Gm12395-201ENSMUST00000144765 536 ntTSL 5 BASIC11.28□□□□□ -0.6
Rab43Q8CG50 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC11.28□□□□□ -0.6
Rab43Q8CG50 Gm25951-201ENSMUST00000175330 64 ntBASIC11.28□□□□□ -0.6
Rab43Q8CG50 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Rab43Q8CG50 Gm17798-201ENSMUST00000182282 1035 ntBASIC11.28□□□□□ -0.6
Rab43Q8CG50 Gm27390-201ENSMUST00000184516 176 ntBASIC11.28□□□□□ -0.6
Rab43Q8CG50 Gm3726-201ENSMUST00000203110 785 ntBASIC11.28□□□□□ -0.6
Rab43Q8CG50 Gm5468-202ENSMUST00000227851 682 ntBASIC11.28□□□□□ -0.6
Rab43Q8CG50 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab43Q8CG50 1700001K19Rik-201ENSMUST00000070659 955 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab43Q8CG50 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Rab43Q8CG50 Rps18-ps3-201ENSMUST00000080443 456 ntBASIC11.28□□□□□ -0.6
Rab43Q8CG50 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab43Q8CG50 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab43Q8CG50 Ush1c-209ENSMUST00000222454 2580 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Rab43Q8CG50 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab43Q8CG50 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab43Q8CG50 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab43Q8CG50 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab43Q8CG50 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.28□□□□□ -0.6
Rab43Q8CG50 Oscar-203ENSMUST00000148012 1796 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Rab43Q8CG50 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab43Q8CG50 Zfp809-206ENSMUST00000215902 1800 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Rab43Q8CG50 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab43Q8CG50 Gm13347-201ENSMUST00000120298 1353 ntBASIC11.28□□□□□ -0.6
Rab43Q8CG50 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Rab43Q8CG50 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC11.28□□□□□ -0.6
Rab43Q8CG50 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.6
Rab43Q8CG50 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rab43Q8CG50 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rab43Q8CG50 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Rab43Q8CG50 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Rab43Q8CG50 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab43Q8CG50 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab43Q8CG50 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab43Q8CG50 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Rab43Q8CG50 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms