Protein–RNA interactions for Protein: Q8CDL9

Ccdc87, Coiled-coil domain-containing protein 87, mousemouse

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc87Q8CDL9 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Samhd1-203ENSMUST00000109549 3245 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Riox2-206ENSMUST00000160571 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Tubb4a-201ENSMUST00000071135 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Hdc-201ENSMUST00000028838 2392 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Hsd17b10-202ENSMUST00000112617 992 ntTSL 5 BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Ftl1-ps2-201ENSMUST00000169477 549 ntBASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Gm9230-201ENSMUST00000188228 532 ntBASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Gm32999-201ENSMUST00000192693 562 ntBASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Gm3786-201ENSMUST00000202659 378 ntBASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Gm44262-201ENSMUST00000204969 372 ntBASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Caly-204ENSMUST00000211283 975 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Gm18212-201ENSMUST00000211678 889 ntBASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 CT485787.1-201ENSMUST00000225617 968 ntBASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Gm35850-202ENSMUST00000211705 2120 ntBASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Ccdc87Q8CDL9 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Gm29358-202ENSMUST00000187941 3227 ntBASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Nod1-201ENSMUST00000060655 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Gm14644-201ENSMUST00000116671 647 ntBASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Dmrtc1a-202ENSMUST00000119624 1149 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Gm4577-201ENSMUST00000135203 716 ntTSL 3 BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Gm26714-201ENSMUST00000181338 1655 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Myh2-201ENSMUST00000018641 6018 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Gm38376-201ENSMUST00000195493 2253 ntBASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Gm37466-201ENSMUST00000195692 652 ntBASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Gm6439-201ENSMUST00000199849 862 ntBASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Gm19187-201ENSMUST00000206781 892 ntBASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Gm45224-201ENSMUST00000208203 414 ntBASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Gm45598-202ENSMUST00000210719 986 ntBASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Gm5740-201ENSMUST00000211003 1857 ntBASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Gm15991-202ENSMUST00000212123 3565 ntBASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Gm33104-201ENSMUST00000214178 1010 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Tfr2-207ENSMUST00000198866 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Ccdc87Q8CDL9 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms