Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lysmd4Q8CC84 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Lysmd4Q8CC84 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Lysmd4Q8CC84 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Lysmd4Q8CC84 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Lysmd4Q8CC84 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lysmd4Q8CC84 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Lysmd4Q8CC84 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.34□□□□□ -0.75
Lysmd4Q8CC84 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.34□□□□□ -0.75
Lysmd4Q8CC84 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 Gm5187-201ENSMUST00000117317 991 ntBASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 Gm14071-201ENSMUST00000117817 509 ntBASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 Gm11793-201ENSMUST00000120433 981 ntBASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 Gm11660-201ENSMUST00000120955 412 ntBASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 S100a3-205ENSMUST00000200508 587 ntAPPRIS P1 TSL 3 BASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 Gm19187-201ENSMUST00000206781 892 ntBASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 Gm7046-201ENSMUST00000221351 977 ntBASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 AC140451.2-201ENSMUST00000228030 664 ntBASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 1810062G17Rik-201ENSMUST00000029268 911 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 Usp17le-202ENSMUST00000211384 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 Smc4-202ENSMUST00000107803 3983 ntTSL 5 BASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 Apbb1-217ENSMUST00000191011 2712 ntAPPRIS ALT1 TSL 1 (best) BASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.33□□□□□ -0.76
Lysmd4Q8CC84 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 1110051M20Rik-201ENSMUST00000064652 2896 ntAPPRIS ALT1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Tnfrsf9-201ENSMUST00000030808 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Adam8-202ENSMUST00000106069 3117 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Adam8-201ENSMUST00000026546 3100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Tnnt3-209ENSMUST00000105947 780 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Gm15954-201ENSMUST00000160746 466 ntTSL 5 BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Gm26956-201ENSMUST00000182176 986 ntBASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Gm18539-201ENSMUST00000204745 1090 ntBASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Olfr1347-205ENSMUST00000220413 964 ntBASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 BC049352-203ENSMUST00000171799 1714 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Gm14698-201ENSMUST00000096420 4226 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Tcp11l1-202ENSMUST00000111118 5474 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
Lysmd4Q8CC84 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms