Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gm2449-201ENSMUST00000180676 585 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sh3rf2Q8BZT2 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sh3rf2Q8BZT2 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.53
Sh3rf2Q8BZT2 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC11.71□□□□□ -0.53
Sh3rf2Q8BZT2 Gm3028-201ENSMUST00000213805 1119 ntBASIC11.71□□□□□ -0.53
Sh3rf2Q8BZT2 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Sh3rf2Q8BZT2 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Sh3rf2Q8BZT2 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Sh3rf2Q8BZT2 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.71□□□□□ -0.53
Sh3rf2Q8BZT2 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.71□□□□□ -0.53
Sh3rf2Q8BZT2 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.54
Sh3rf2Q8BZT2 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.71□□□□□ -0.54
Sh3rf2Q8BZT2 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.71□□□□□ -0.54
Sh3rf2Q8BZT2 March7-202ENSMUST00000102747 2271 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sh3rf2Q8BZT2 Wasf2-202ENSMUST00000105912 2236 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sh3rf2Q8BZT2 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Sh3rf2Q8BZT2 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sh3rf2Q8BZT2 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Sh3rf2Q8BZT2 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Sh3rf2Q8BZT2 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Map3k11-201ENSMUST00000004156 3801 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Camk4-201ENSMUST00000042868 12331 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Gm11628-201ENSMUST00000117568 171 ntBASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Gm13422-201ENSMUST00000118834 504 ntBASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Gm14395-201ENSMUST00000120494 563 ntBASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Mir6407-201ENSMUST00000184510 101 ntBASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Gm5100-201ENSMUST00000195631 589 ntBASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 AC114645.1-201ENSMUST00000215831 187 ntBASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 AC165154.1-201ENSMUST00000226661 340 ntBASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Atp5h-201ENSMUST00000043931 625 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Lysmd1-201ENSMUST00000066386 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Camk2b-207ENSMUST00000101586 1590 ntTSL 5 BASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Apol7e-201ENSMUST00000096358 2227 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Sh3rf2Q8BZT2 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Maml2-202ENSMUST00000159294 6404 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Zfp568-201ENSMUST00000074322 2016 ntAPPRIS P3 TSL 5 BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Gm14685-201ENSMUST00000088459 2864 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Gm25063-201ENSMUST00000104666 94 ntBASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Gm14892-201ENSMUST00000117636 267 ntBASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Nop16-202ENSMUST00000148222 790 ntTSL 5 BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Gm25492-201ENSMUST00000157383 129 ntBASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Mrpl20-206ENSMUST00000185148 494 ntTSL 3 BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Gm29410-201ENSMUST00000188383 694 ntBASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC11.69□□□□□ -0.54
Sh3rf2Q8BZT2 Gm18561-201ENSMUST00000206027 804 ntBASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms