Protein–RNA interactions for Protein: Q8BY87

Usp47, Ubiquitin carboxyl-terminal hydrolase 47, mousemouse

Predictions only

Length 1,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp47Q8BY87 Gm14892-201ENSMUST00000117636 267 ntBASIC16.21■□□□□ 0.19
Usp47Q8BY87 Snhg17-205ENSMUST00000151331 529 ntTSL 2 BASIC16.21■□□□□ 0.19
Usp47Q8BY87 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Usp47Q8BY87 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Usp47Q8BY87 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Usp47Q8BY87 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Usp47Q8BY87 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Usp47Q8BY87 Rwdd2a-202ENSMUST00000179212 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp47Q8BY87 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Usp47Q8BY87 Gm8436-201ENSMUST00000210152 1080 ntBASIC16.21■□□□□ 0.19
Usp47Q8BY87 Gm5749-201ENSMUST00000210673 1090 ntBASIC16.21■□□□□ 0.19
Usp47Q8BY87 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC16.21■□□□□ 0.19
Usp47Q8BY87 CT009527.1-201ENSMUST00000224205 339 ntBASIC16.21■□□□□ 0.19
Usp47Q8BY87 Gm9962-201ENSMUST00000085241 321 ntTSL 5 BASIC16.21■□□□□ 0.19
Usp47Q8BY87 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp47Q8BY87 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp47Q8BY87 Olfr658-202ENSMUST00000210641 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp47Q8BY87 Olfr658-201ENSMUST00000089296 2912 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp47Q8BY87 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp47Q8BY87 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Usp47Q8BY87 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Usp47Q8BY87 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Usp47Q8BY87 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.18
Usp47Q8BY87 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp47Q8BY87 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC16.2■□□□□ 0.18
Usp47Q8BY87 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp47Q8BY87 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp47Q8BY87 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC16.2■□□□□ 0.18
Usp47Q8BY87 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp47Q8BY87 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp47Q8BY87 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Usp47Q8BY87 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Usp47Q8BY87 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC16.2■□□□□ 0.18
Usp47Q8BY87 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Usp47Q8BY87 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC16.2■□□□□ 0.18
Usp47Q8BY87 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Usp47Q8BY87 Gm4879-201ENSMUST00000122190 1272 ntBASIC16.2■□□□□ 0.18
Usp47Q8BY87 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
Usp47Q8BY87 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Usp47Q8BY87 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC16.2■□□□□ 0.18
Usp47Q8BY87 Gm19246-201ENSMUST00000173599 255 ntBASIC16.2■□□□□ 0.18
Usp47Q8BY87 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC16.2■□□□□ 0.18
Usp47Q8BY87 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Usp47Q8BY87 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC16.2■□□□□ 0.18
Usp47Q8BY87 Gm43380-201ENSMUST00000200421 220 ntBASIC16.2■□□□□ 0.18
Usp47Q8BY87 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC16.2■□□□□ 0.18
Usp47Q8BY87 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp47Q8BY87 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Usp47Q8BY87 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Usp47Q8BY87 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp47Q8BY87 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC16.2■□□□□ 0.18
Usp47Q8BY87 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp47Q8BY87 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp47Q8BY87 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Usp47Q8BY87 Gm37859-201ENSMUST00000195529 2173 ntBASIC16.2■□□□□ 0.18
Usp47Q8BY87 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Usp47Q8BY87 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Usp47Q8BY87 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Usp47Q8BY87 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Usp47Q8BY87 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp47Q8BY87 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp47Q8BY87 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp47Q8BY87 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp47Q8BY87 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp47Q8BY87 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC16.19■□□□□ 0.18
Usp47Q8BY87 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp47Q8BY87 Rragd-202ENSMUST00000084747 4295 ntTSL 5 BASIC16.19■□□□□ 0.18
Usp47Q8BY87 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp47Q8BY87 Rabep1-203ENSMUST00000100928 3860 ntTSL 5 BASIC16.19■□□□□ 0.18
Usp47Q8BY87 D630008O14Rik-201ENSMUST00000144260 1568 ntTSL 2 BASIC16.19■□□□□ 0.18
Usp47Q8BY87 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp47Q8BY87 Snord17-201ENSMUST00000104526 238 ntBASIC16.19■□□□□ 0.18
Usp47Q8BY87 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Usp47Q8BY87 Gm13284-201ENSMUST00000121020 547 ntBASIC16.19■□□□□ 0.18
Usp47Q8BY87 Gm12030-201ENSMUST00000121917 223 ntBASIC16.19■□□□□ 0.18
Usp47Q8BY87 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp47Q8BY87 Gm25554-201ENSMUST00000158075 113 ntBASIC16.19■□□□□ 0.18
Usp47Q8BY87 Gm9358-201ENSMUST00000183067 927 ntBASIC16.19■□□□□ 0.18
Usp47Q8BY87 Gm42816-201ENSMUST00000198433 325 ntBASIC16.19■□□□□ 0.18
Usp47Q8BY87 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC16.19■□□□□ 0.18
Usp47Q8BY87 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp47Q8BY87 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC16.19■□□□□ 0.18
Usp47Q8BY87 AC160028.1-201ENSMUST00000219645 1095 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp47Q8BY87 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp47Q8BY87 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp47Q8BY87 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp47Q8BY87 Omt2b-201ENSMUST00000043734 735 ntAPPRIS P1 TSL 2 BASIC16.19■□□□□ 0.18
Usp47Q8BY87 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC16.19■□□□□ 0.18
Usp47Q8BY87 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC16.19■□□□□ 0.18
Usp47Q8BY87 Asz1-201ENSMUST00000010940 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp47Q8BY87 Matn2-202ENSMUST00000163455 3577 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
Usp47Q8BY87 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp47Q8BY87 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp47Q8BY87 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp47Q8BY87 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp47Q8BY87 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
Usp47Q8BY87 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
Usp47Q8BY87 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC16.19■□□□□ 0.18
Usp47Q8BY87 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Usp47Q8BY87 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms