Protein–RNA interactions for Protein: Q8BL00

Cdhr3, Cadherin-related family member 3, mousemouse

Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdhr3Q8BL00 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 4833405L11Rik-202ENSMUST00000222639 2145 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Elavl2-201ENSMUST00000008633 3730 ntAPPRIS P4 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Trub2-201ENSMUST00000048044 3408 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Epn3-202ENSMUST00000127305 3884 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Cdhr3Q8BL00 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Vars2-201ENSMUST00000043674 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Zfp235-201ENSMUST00000056549 3373 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Flad1-202ENSMUST00000107426 2238 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Svop-201ENSMUST00000058472 3379 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Gm14071-201ENSMUST00000117817 509 ntBASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Gm44805-202ENSMUST00000150569 587 ntAPPRIS P1 TSL 2 BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Gm29164-201ENSMUST00000185454 1024 ntBASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Gm42629-201ENSMUST00000199063 1102 ntBASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Gm18062-201ENSMUST00000208020 547 ntBASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Gm18055-201ENSMUST00000208254 547 ntBASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Gm45495-201ENSMUST00000200940 1700 ntBASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Itga4-201ENSMUST00000099972 9767 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Aak1-201ENSMUST00000003710 7203 ntAPPRIS P3 TSL 5 BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Asb7-202ENSMUST00000124899 4928 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Cdhr3Q8BL00 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdhr3Q8BL00 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdhr3Q8BL00 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdhr3Q8BL00 Synj2-203ENSMUST00000115784 2634 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cdhr3Q8BL00 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cdhr3Q8BL00 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdhr3Q8BL00 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdhr3Q8BL00 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdhr3Q8BL00 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Cdhr3Q8BL00 Nynrin-201ENSMUST00000100529 6990 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdhr3Q8BL00 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdhr3Q8BL00 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cdhr3Q8BL00 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cdhr3Q8BL00 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdhr3Q8BL00 Gpr179-201ENSMUST00000093942 9219 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Cdhr3Q8BL00 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cdhr3Q8BL00 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdhr3Q8BL00 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdhr3Q8BL00 AC159195.3-201ENSMUST00000225162 2211 ntBASIC10.05□□□□□ -0.8
Cdhr3Q8BL00 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdhr3Q8BL00 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Cdhr3Q8BL00 Gm22133-201ENSMUST00000102082 109 ntBASIC10.05□□□□□ -0.8
Cdhr3Q8BL00 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdhr3Q8BL00 Mogat1-201ENSMUST00000012331 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdhr3Q8BL00 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.05□□□□□ -0.8
Cdhr3Q8BL00 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Cdhr3Q8BL00 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdhr3Q8BL00 Gm4310-201ENSMUST00000177847 889 ntBASIC10.05□□□□□ -0.8
Cdhr3Q8BL00 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.05□□□□□ -0.8
Cdhr3Q8BL00 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.05□□□□□ -0.8
Cdhr3Q8BL00 Ip6k2-202ENSMUST00000192028 1199 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Cdhr3Q8BL00 AY702102-202ENSMUST00000194651 1173 ntBASIC10.05□□□□□ -0.8
Cdhr3Q8BL00 Gm44651-201ENSMUST00000207343 372 ntBASIC10.05□□□□□ -0.8
Cdhr3Q8BL00 Nmur1-201ENSMUST00000027440 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Cdhr3Q8BL00 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 65.3 ms