Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smg1Q8BKX6 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smg1Q8BKX6 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC9.47□□□□□ -0.89
Smg1Q8BKX6 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
Smg1Q8BKX6 Gm38192-201ENSMUST00000194364 1847 ntBASIC9.47□□□□□ -0.89
Smg1Q8BKX6 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC9.46□□□□□ -0.89
Smg1Q8BKX6 Slc25a14-208ENSMUST00000177710 1516 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smg1Q8BKX6 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Smg1Q8BKX6 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Smg1Q8BKX6 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smg1Q8BKX6 Gm14715-201ENSMUST00000156823 643 ntTSL 3 BASIC9.46□□□□□ -0.89
Smg1Q8BKX6 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC9.46□□□□□ -0.89
Smg1Q8BKX6 Mok-204ENSMUST00000177224 551 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Smg1Q8BKX6 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smg1Q8BKX6 Lyn-201ENSMUST00000041377 3463 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smg1Q8BKX6 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smg1Q8BKX6 Mx1-202ENSMUST00000113768 2695 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Smg1Q8BKX6 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smg1Q8BKX6 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smg1Q8BKX6 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smg1Q8BKX6 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Smg1Q8BKX6 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smg1Q8BKX6 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smg1Q8BKX6 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smg1Q8BKX6 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smg1Q8BKX6 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smg1Q8BKX6 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Smg1Q8BKX6 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smg1Q8BKX6 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smg1Q8BKX6 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC9.46□□□□□ -0.89
Smg1Q8BKX6 4930433J02Rik-201ENSMUST00000194719 1386 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Smg1Q8BKX6 Rgs8-205ENSMUST00000111815 765 ntTSL 5 BASIC9.46□□□□□ -0.89
Smg1Q8BKX6 Elobl-203ENSMUST00000121228 704 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
Smg1Q8BKX6 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC9.46□□□□□ -0.89
Smg1Q8BKX6 Gm44498-201ENSMUST00000199509 111 ntBASIC9.46□□□□□ -0.89
Smg1Q8BKX6 Gm44173-201ENSMUST00000204316 132 ntBASIC9.46□□□□□ -0.89
Smg1Q8BKX6 Gm5738-201ENSMUST00000206016 779 ntBASIC9.46□□□□□ -0.89
Smg1Q8BKX6 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC9.46□□□□□ -0.89
Smg1Q8BKX6 AC122891.1-201ENSMUST00000218671 268 ntBASIC9.46□□□□□ -0.89
Smg1Q8BKX6 AC118639.1-202ENSMUST00000226957 653 ntBASIC9.46□□□□□ -0.89
Smg1Q8BKX6 Clec1b-201ENSMUST00000032262 1090 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
Smg1Q8BKX6 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC9.46□□□□□ -0.89
Smg1Q8BKX6 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Smg1Q8BKX6 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
Smg1Q8BKX6 Gm42829-201ENSMUST00000198417 2585 ntBASIC9.46□□□□□ -0.9
Smg1Q8BKX6 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smg1Q8BKX6 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smg1Q8BKX6 Ralgps1-202ENSMUST00000091039 2738 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Smg1Q8BKX6 Gm45643-201ENSMUST00000211364 1484 ntBASIC9.46□□□□□ -0.9
Smg1Q8BKX6 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smg1Q8BKX6 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Smg1Q8BKX6 Snord23-201ENSMUST00000116828 109 ntBASIC9.46□□□□□ -0.9
Smg1Q8BKX6 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smg1Q8BKX6 Gm14630-201ENSMUST00000118057 246 ntBASIC9.46□□□□□ -0.9
Smg1Q8BKX6 Tcstv1-201ENSMUST00000178510 1280 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
Smg1Q8BKX6 Gm4960-201ENSMUST00000182928 1001 ntBASIC9.46□□□□□ -0.9
Smg1Q8BKX6 Nabp1-206ENSMUST00000188051 680 ntTSL 3 BASIC9.46□□□□□ -0.9
Smg1Q8BKX6 Lcn3-201ENSMUST00000028304 684 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smg1Q8BKX6 Rpl35a-201ENSMUST00000078804 491 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smg1Q8BKX6 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Smg1Q8BKX6 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC9.46□□□□□ -0.9
Smg1Q8BKX6 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smg1Q8BKX6 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smg1Q8BKX6 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smg1Q8BKX6 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smg1Q8BKX6 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smg1Q8BKX6 Arhgap25-201ENSMUST00000071024 2635 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
Smg1Q8BKX6 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
Smg1Q8BKX6 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
Smg1Q8BKX6 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smg1Q8BKX6 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smg1Q8BKX6 Pttg1ip-208ENSMUST00000162943 721 ntAPPRIS ALT2 TSL 3 BASIC9.45□□□□□ -0.9
Smg1Q8BKX6 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Smg1Q8BKX6 Gm28937-201ENSMUST00000185413 695 ntBASIC9.45□□□□□ -0.9
Smg1Q8BKX6 Gm29400-201ENSMUST00000187208 695 ntBASIC9.45□□□□□ -0.9
Smg1Q8BKX6 Gm28662-201ENSMUST00000188446 695 ntBASIC9.45□□□□□ -0.9
Smg1Q8BKX6 Gm28251-201ENSMUST00000188835 695 ntBASIC9.45□□□□□ -0.9
Smg1Q8BKX6 Gm37318-201ENSMUST00000194325 695 ntBASIC9.45□□□□□ -0.9
Smg1Q8BKX6 Gm38017-201ENSMUST00000194768 695 ntBASIC9.45□□□□□ -0.9
Smg1Q8BKX6 Gm37287-201ENSMUST00000195449 695 ntBASIC9.45□□□□□ -0.9
Smg1Q8BKX6 Gm37793-201ENSMUST00000195548 695 ntBASIC9.45□□□□□ -0.9
Smg1Q8BKX6 Gm5194-201ENSMUST00000221457 742 ntBASIC9.45□□□□□ -0.9
Smg1Q8BKX6 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
Smg1Q8BKX6 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Smg1Q8BKX6 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smg1Q8BKX6 Gm38246-201ENSMUST00000194318 1511 ntBASIC9.45□□□□□ -0.9
Smg1Q8BKX6 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smg1Q8BKX6 Gm43242-201ENSMUST00000199507 1776 ntBASIC9.45□□□□□ -0.9
Smg1Q8BKX6 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smg1Q8BKX6 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smg1Q8BKX6 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smg1Q8BKX6 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smg1Q8BKX6 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smg1Q8BKX6 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Smg1Q8BKX6 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smg1Q8BKX6 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Smg1Q8BKX6 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smg1Q8BKX6 Lims1-201ENSMUST00000020077 1565 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Smg1Q8BKX6 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Smg1Q8BKX6 Gm20495-201ENSMUST00000173902 235 ntBASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 56.5 ms