Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Usp6nlQ80XC3 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Usp6nlQ80XC3 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC12.77□□□□□ -0.37
Usp6nlQ80XC3 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC12.77□□□□□ -0.37
Usp6nlQ80XC3 Gm15528-201ENSMUST00000117821 864 ntBASIC12.77□□□□□ -0.37
Usp6nlQ80XC3 Gm13351-201ENSMUST00000118087 414 ntBASIC12.77□□□□□ -0.37
Usp6nlQ80XC3 Gm11500-201ENSMUST00000118237 601 ntBASIC12.77□□□□□ -0.37
Usp6nlQ80XC3 Gm21987-201ENSMUST00000119704 456 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Usp6nlQ80XC3 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Usp6nlQ80XC3 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Usp6nlQ80XC3 Gm17192-201ENSMUST00000169031 511 ntBASIC12.77□□□□□ -0.37
Usp6nlQ80XC3 AC238811.4-201ENSMUST00000178019 1246 ntBASIC12.77□□□□□ -0.37
Usp6nlQ80XC3 AC238940.3-201ENSMUST00000178830 1246 ntBASIC12.77□□□□□ -0.37
Usp6nlQ80XC3 Gm9081-201ENSMUST00000182346 991 ntBASIC12.77□□□□□ -0.37
Usp6nlQ80XC3 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC12.77□□□□□ -0.37
Usp6nlQ80XC3 AC126799.1-201ENSMUST00000221976 246 ntBASIC12.77□□□□□ -0.37
Usp6nlQ80XC3 AC156568.1-201ENSMUST00000223018 712 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Usp6nlQ80XC3 AC164618.2-201ENSMUST00000224770 573 ntBASIC12.77□□□□□ -0.37
Usp6nlQ80XC3 Prss51-201ENSMUST00000063785 961 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Usp6nlQ80XC3 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Usp6nlQ80XC3 Gm7224-201ENSMUST00000121359 2066 ntBASIC12.77□□□□□ -0.37
Usp6nlQ80XC3 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Usp6nlQ80XC3 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp6nlQ80XC3 Grm5-202ENSMUST00000125009 8047 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Usp6nlQ80XC3 Platr19-201ENSMUST00000171380 1466 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Usp6nlQ80XC3 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Usp6nlQ80XC3 Myzap-201ENSMUST00000093823 2283 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp6nlQ80XC3 Tarm1-203ENSMUST00000203821 1535 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp6nlQ80XC3 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp6nlQ80XC3 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp6nlQ80XC3 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Usp6nlQ80XC3 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 Herc3-201ENSMUST00000031823 3596 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 Gm8146-201ENSMUST00000192106 1847 ntBASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 Odf2l-201ENSMUST00000029920 2239 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 Gm28038-201ENSMUST00000143119 378 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 Gm21778-201ENSMUST00000178779 471 ntBASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 Gm23694-201ENSMUST00000179335 110 ntBASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 Gm4895-201ENSMUST00000181646 1137 ntBASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 2010109P13Rik-201ENSMUST00000204605 392 ntBASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 4930449E01Rik-201ENSMUST00000022711 595 ntTSL 2 BASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 Aimp1-201ENSMUST00000029663 1126 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 Col14a1-201ENSMUST00000023053 6457 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 Wdr92-201ENSMUST00000046955 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 Lrrc27-201ENSMUST00000016124 2113 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Usp6nlQ80XC3 Sorl1-201ENSMUST00000060989 10715 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Specc1-212ENSMUST00000202178 2932 ntTSL 5 BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Vsir-202ENSMUST00000105459 1290 ntTSL 5 BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Tomm5-202ENSMUST00000107808 679 ntTSL 2 BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Gm12194-201ENSMUST00000117756 1012 ntBASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Gm5257-201ENSMUST00000121823 790 ntBASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Prr33-202ENSMUST00000151580 399 ntTSL 5 BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Tmem39a-204ENSMUST00000163884 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Cysltr2-202ENSMUST00000169168 1744 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Gm18201-201ENSMUST00000174735 875 ntBASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Gm43671-201ENSMUST00000200422 433 ntBASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Gm44190-201ENSMUST00000205083 1401 ntBASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Isoc2b-205ENSMUST00000208816 820 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 Gm45500-201ENSMUST00000211676 803 ntBASIC12.75□□□□□ -0.37
Usp6nlQ80XC3 AC154361.2-201ENSMUST00000224747 943 ntBASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms