Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.06□□□□□ -0.64
Vrk1Q80X41 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Agxt2-204ENSMUST00000110542 2198 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Tle1-201ENSMUST00000030095 2569 ntTSL 5 BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Wdr89-201ENSMUST00000062370 2979 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Gm14441-201ENSMUST00000121960 540 ntBASIC11.06□□□□□ -0.64
Vrk1Q80X41 Gm15744-201ENSMUST00000161734 213 ntBASIC11.06□□□□□ -0.64
Vrk1Q80X41 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Gm5982-201ENSMUST00000196234 512 ntBASIC11.06□□□□□ -0.64
Vrk1Q80X41 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.06□□□□□ -0.64
Vrk1Q80X41 AC165154.1-201ENSMUST00000226661 340 ntBASIC11.06□□□□□ -0.64
Vrk1Q80X41 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Cdc37-201ENSMUST00000019615 7851 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Nol4-204ENSMUST00000097651 4549 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Esr1-201ENSMUST00000067086 4344 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Pde6c-201ENSMUST00000025956 2586 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Gm6655-201ENSMUST00000201932 1309 ntBASIC11.06□□□□□ -0.64
Vrk1Q80X41 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vrk1Q80X41 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.06□□□□□ -0.64
Vrk1Q80X41 1110046J04Rik-202ENSMUST00000180906 2776 ntBASIC11.05□□□□□ -0.64
Vrk1Q80X41 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vrk1Q80X41 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Vrk1Q80X41 Paip2b-201ENSMUST00000058383 3982 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vrk1Q80X41 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vrk1Q80X41 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Vrk1Q80X41 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vrk1Q80X41 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vrk1Q80X41 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.05□□□□□ -0.64
Vrk1Q80X41 Dmbt1-202ENSMUST00000208311 6272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vrk1Q80X41 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vrk1Q80X41 4933431E20Rik-201ENSMUST00000131345 5407 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Vrk1Q80X41 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
Vrk1Q80X41 Gm25063-201ENSMUST00000104666 94 ntBASIC11.05□□□□□ -0.64
Vrk1Q80X41 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Vrk1Q80X41 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Vrk1Q80X41 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.05□□□□□ -0.64
Vrk1Q80X41 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vrk1Q80X41 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Vrk1Q80X41 Gm27390-201ENSMUST00000184516 176 ntBASIC11.05□□□□□ -0.64
Vrk1Q80X41 2610027F03Rik-202ENSMUST00000186982 603 ntTSL 5 BASIC11.05□□□□□ -0.64
Vrk1Q80X41 Gm29410-201ENSMUST00000188383 694 ntBASIC11.05□□□□□ -0.64
Vrk1Q80X41 AC124457.1-201ENSMUST00000198845 120 ntBASIC11.05□□□□□ -0.64
Vrk1Q80X41 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.05□□□□□ -0.64
Vrk1Q80X41 Gm45120-201ENSMUST00000208880 408 ntBASIC11.05□□□□□ -0.64
Vrk1Q80X41 Gm9139-201ENSMUST00000218817 700 ntBASIC11.05□□□□□ -0.64
Vrk1Q80X41 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.05□□□□□ -0.64
Vrk1Q80X41 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vrk1Q80X41 Zfp335-201ENSMUST00000041361 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vrk1Q80X41 Gm23105-201ENSMUST00000083719 134 ntBASIC11.05□□□□□ -0.64
Vrk1Q80X41 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vrk1Q80X41 Dab2ip-207ENSMUST00000112992 6184 ntTSL 5 BASIC11.05□□□□□ -0.64
Vrk1Q80X41 Gm15609-201ENSMUST00000155610 2960 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Vrk1Q80X41 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vrk1Q80X41 Oxnad1-201ENSMUST00000022462 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vrk1Q80X41 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Vrk1Q80X41 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vrk1Q80X41 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vrk1Q80X41 Ceacam12-203ENSMUST00000108487 1495 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vrk1Q80X41 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC11.05□□□□□ -0.64
Vrk1Q80X41 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vrk1Q80X41 Myocd-201ENSMUST00000101042 2585 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
Vrk1Q80X41 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Vrk1Q80X41 Lamp5-201ENSMUST00000057503 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vrk1Q80X41 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
Vrk1Q80X41 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Vrk1Q80X41 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vrk1Q80X41 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vrk1Q80X41 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vrk1Q80X41 Gm2916-202ENSMUST00000181779 1702 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Vrk1Q80X41 Scmh1-201ENSMUST00000000087 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vrk1Q80X41 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Vrk1Q80X41 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vrk1Q80X41 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Vrk1Q80X41 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms