Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Gm5451-201ENSMUST00000080545 579 ntBASIC11.95□□□□□ -0.5
Trim62Q80V85 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim62Q80V85 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim62Q80V85 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim62Q80V85 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim62Q80V85 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim62Q80V85 Gm14169-201ENSMUST00000124676 2519 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim62Q80V85 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim62Q80V85 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim62Q80V85 Ift140-201ENSMUST00000024983 5489 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim62Q80V85 Mon1b-202ENSMUST00000179926 3470 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim62Q80V85 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim62Q80V85 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trim62Q80V85 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim62Q80V85 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim62Q80V85 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Trim62Q80V85 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC11.95□□□□□ -0.5
Trim62Q80V85 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim62Q80V85 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim62Q80V85 Abcc10-202ENSMUST00000095261 5266 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trim62Q80V85 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim62Q80V85 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim62Q80V85 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trim62Q80V85 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim62Q80V85 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim62Q80V85 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC11.94□□□□□ -0.5
Trim62Q80V85 Gm37542-201ENSMUST00000192563 2832 ntBASIC11.94□□□□□ -0.5
Trim62Q80V85 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim62Q80V85 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Trim62Q80V85 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim62Q80V85 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim62Q80V85 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim62Q80V85 Gm4294-201ENSMUST00000105169 614 ntBASIC11.94□□□□□ -0.5
Trim62Q80V85 Cdc42se1-204ENSMUST00000107201 907 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim62Q80V85 Gm15615-201ENSMUST00000118876 198 ntBASIC11.94□□□□□ -0.5
Trim62Q80V85 Gm15573-201ENSMUST00000119487 540 ntBASIC11.94□□□□□ -0.5
Trim62Q80V85 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim62Q80V85 Gm13328-201ENSMUST00000120816 1020 ntBASIC11.94□□□□□ -0.5
Trim62Q80V85 Gm11836-201ENSMUST00000121022 441 ntBASIC11.94□□□□□ -0.5
Trim62Q80V85 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim62Q80V85 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.94□□□□□ -0.5
Trim62Q80V85 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim62Q80V85 Kctd18-210ENSMUST00000164963 2114 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim62Q80V85 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim62Q80V85 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim62Q80V85 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC11.94□□□□□ -0.5
Trim62Q80V85 Gm8574-201ENSMUST00000203207 924 ntBASIC11.94□□□□□ -0.5
Trim62Q80V85 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.94□□□□□ -0.5
Trim62Q80V85 Gm9132-201ENSMUST00000210182 832 ntBASIC11.94□□□□□ -0.5
Trim62Q80V85 CT485606.1-201ENSMUST00000213187 878 ntBASIC11.94□□□□□ -0.5
Trim62Q80V85 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim62Q80V85 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trim62Q80V85 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Trim62Q80V85 Olfr584-201ENSMUST00000098210 964 ntBASIC11.94□□□□□ -0.5
Trim62Q80V85 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim62Q80V85 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trim62Q80V85 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Trim62Q80V85 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim62Q80V85 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC11.94□□□□□ -0.5
Trim62Q80V85 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim62Q80V85 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim62Q80V85 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim62Q80V85 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim62Q80V85 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim62Q80V85 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Trim62Q80V85 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim62Q80V85 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Trim62Q80V85 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim62Q80V85 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim62Q80V85 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim62Q80V85 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Trim62Q80V85 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim62Q80V85 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim62Q80V85 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim62Q80V85 Tmem176b-202ENSMUST00000164733 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim62Q80V85 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim62Q80V85 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trim62Q80V85 Tuft1-201ENSMUST00000006123 2631 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim62Q80V85 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim62Q80V85 Gm21998-201ENSMUST00000117552 1308 ntBASIC11.93□□□□□ -0.5
Trim62Q80V85 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim62Q80V85 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim62Q80V85 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim62Q80V85 Myo7a-204ENSMUST00000107128 7506 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trim62Q80V85 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim62Q80V85 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim62Q80V85 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Trim62Q80V85 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Trim62Q80V85 Arhgef3-204ENSMUST00000225949 3198 ntBASIC11.93□□□□□ -0.5
Trim62Q80V85 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim62Q80V85 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Trim62Q80V85 Gm12616-201ENSMUST00000118594 382 ntBASIC11.93□□□□□ -0.5
Trim62Q80V85 Gm16219-201ENSMUST00000120096 274 ntBASIC11.93□□□□□ -0.5
Trim62Q80V85 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC11.93□□□□□ -0.5
Trim62Q80V85 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC11.93□□□□□ -0.5
Trim62Q80V85 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.93□□□□□ -0.5
Trim62Q80V85 Gm22846-201ENSMUST00000157706 270 ntBASIC11.93□□□□□ -0.5
Trim62Q80V85 Gm9550-201ENSMUST00000161130 862 ntBASIC11.93□□□□□ -0.5
Trim62Q80V85 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC11.93□□□□□ -0.5
Trim62Q80V85 Gm12624-201ENSMUST00000177615 382 ntBASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms