Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ddx55Q6ZPL9 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Calm1-202ENSMUST00000110082 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Gm5308-201ENSMUST00000196752 1354 ntBASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Gm9915-201ENSMUST00000066196 1383 ntBASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Gm18986-201ENSMUST00000216029 1986 ntBASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Lemd1-201ENSMUST00000112357 964 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Abhd14a-204ENSMUST00000185334 1109 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Gm17749-201ENSMUST00000216282 690 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Akr1c18-201ENSMUST00000021635 1200 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Gm6653-201ENSMUST00000218063 1288 ntBASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 AC122891.1-201ENSMUST00000218671 268 ntBASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 CT010480.2-201ENSMUST00000225424 737 ntBASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Gm25580-201ENSMUST00000083409 327 ntBASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Gm14005-210ENSMUST00000225087 1413 ntBASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Chrnd-201ENSMUST00000073252 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Ripor3-201ENSMUST00000099073 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Nudt13-207ENSMUST00000224311 1574 ntBASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ddx55Q6ZPL9 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Cog3-203ENSMUST00000227473 4197 ntBASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 AC174797.1-201ENSMUST00000224339 1649 ntBASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Smap1-202ENSMUST00000129254 1365 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Fbp2-201ENSMUST00000021907 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Ighv1-50-201ENSMUST00000103521 390 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Ndufb5-204ENSMUST00000127477 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Gm26368-201ENSMUST00000157826 118 ntBASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 4933417D19Rik-201ENSMUST00000181432 1229 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Gm5342-201ENSMUST00000181982 1003 ntBASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Gm31274-201ENSMUST00000197356 229 ntBASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Gm44008-201ENSMUST00000204345 412 ntBASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Lsm8-201ENSMUST00000056398 807 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Ddx55Q6ZPL9 Cxcr5-204ENSMUST00000215293 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms