Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Gm11957-201ENSMUST00000118304 779 ntBASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Psma1-203ENSMUST00000135570 960 ntTSL 3 BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Gm43752-201ENSMUST00000198475 697 ntBASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Gm5340-201ENSMUST00000203733 880 ntBASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Selenos-204ENSMUST00000206044 911 ntTSL 3 BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 AC170997.1-201ENSMUST00000214554 1053 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Gm2594-201ENSMUST00000214774 742 ntBASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Gm3318-201ENSMUST00000217604 1183 ntBASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Ifi27-203ENSMUST00000076788 708 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Grid2ip-201ENSMUST00000010969 3459 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Rara-201ENSMUST00000068133 3384 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Snrnp40Q6PE01 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Acvr1c-201ENSMUST00000028178 9162 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Dip2a-202ENSMUST00000105417 6383 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Gm15528-201ENSMUST00000117821 864 ntBASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Gm11960-201ENSMUST00000122068 925 ntBASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 1110028F11Rik-201ENSMUST00000137077 837 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Gm34379-201ENSMUST00000195036 290 ntBASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Gm5599-201ENSMUST00000209602 788 ntBASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Gm45542-201ENSMUST00000210456 438 ntTSL 2 BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Olfr692-202ENSMUST00000217827 1126 ntBASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Gm8255-201ENSMUST00000218693 305 ntBASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Bloc1s1-201ENSMUST00000026405 550 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Triap1-201ENSMUST00000031508 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Elob-201ENSMUST00000069579 508 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Olfr692-201ENSMUST00000098152 1126 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Mccc1os-202ENSMUST00000137198 2686 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Gm10652-201ENSMUST00000199790 2622 ntBASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC10.16□□□□□ -0.78
Snrnp40Q6PE01 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Snrnp40Q6PE01 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms