Protein–RNA interactions for Protein: Q6IRT3

Parpbp, PCNA-interacting partner, mousemouse

Predictions only

Length 573 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ParpbpQ6IRT3 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Dnajb6-201ENSMUST00000008733 2918 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Zfp593-201ENSMUST00000030644 1994 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Fam49a-201ENSMUST00000069005 1771 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
ParpbpQ6IRT3 Plrg1-202ENSMUST00000122128 1608 ntTSL 5 BASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Olfr139-204ENSMUST00000214111 1311 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Ppnr-201ENSMUST00000190974 3525 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Plcd1-201ENSMUST00000010804 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Pip5kl1-201ENSMUST00000055304 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Rad54l-202ENSMUST00000102705 2780 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Psmc3-201ENSMUST00000002171 1819 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Gm12857-201ENSMUST00000117678 592 ntBASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Gm11663-201ENSMUST00000117888 290 ntBASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Gm12501-201ENSMUST00000119163 529 ntBASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Gm12196-201ENSMUST00000120954 262 ntBASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Rn7s1-201ENSMUST00000174924 300 ntBASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Rn7s2-201ENSMUST00000175032 300 ntBASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Gm26461-201ENSMUST00000175064 290 ntBASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Gm4310-201ENSMUST00000177847 889 ntBASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Mbtps1-201ENSMUST00000081381 4195 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Grip1-205ENSMUST00000105262 4996 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.87□□□□□ -0.67
ParpbpQ6IRT3 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Pafah2-201ENSMUST00000105869 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Ticam2-201ENSMUST00000070084 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Col20a1-201ENSMUST00000108856 4489 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Prune1-201ENSMUST00000015855 3140 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Parvg-201ENSMUST00000023074 2619 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Gm23200-201ENSMUST00000104379 132 ntBASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Gm12217-201ENSMUST00000118858 696 ntBASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Gm15207-201ENSMUST00000119259 442 ntBASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Gm11960-201ENSMUST00000122068 925 ntBASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Gm10714-201ENSMUST00000131346 874 ntTSL 2 BASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Cfap73-201ENSMUST00000177908 921 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Gm28937-201ENSMUST00000185413 695 ntBASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Gm29400-201ENSMUST00000187208 695 ntBASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Gm28662-201ENSMUST00000188446 695 ntBASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Gm28251-201ENSMUST00000188835 695 ntBASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Gm37318-201ENSMUST00000194325 695 ntBASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Gm38017-201ENSMUST00000194768 695 ntBASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Gm37287-201ENSMUST00000195449 695 ntBASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Gm37793-201ENSMUST00000195548 695 ntBASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Gm44044-201ENSMUST00000205178 1089 ntBASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Acy1-208ENSMUST00000214275 1284 ntTSL 5 BASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Gm2594-201ENSMUST00000214774 742 ntBASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Sfxn3-201ENSMUST00000062213 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Siglec1-202ENSMUST00000110226 1861 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Gm37542-201ENSMUST00000192563 2832 ntBASIC10.86□□□□□ -0.67
ParpbpQ6IRT3 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms