Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm20568-201ENSMUST00000197129 208 ntBASIC13.37□□□□□ -0.27
Scn9aQ62205 Gm43726-201ENSMUST00000199110 775 ntBASIC13.37□□□□□ -0.27
Scn9aQ62205 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn9aQ62205 Ghrl-205ENSMUST00000204163 447 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn9aQ62205 Abracl-203ENSMUST00000218994 425 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Scn9aQ62205 Olfr1335-202ENSMUST00000219094 1148 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
Scn9aQ62205 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC13.37□□□□□ -0.27
Scn9aQ62205 Izumo1r-202ENSMUST00000069408 1172 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scn9aQ62205 Olfr1335-201ENSMUST00000084313 1148 ntAPPRIS ALT2 BASIC13.37□□□□□ -0.27
Scn9aQ62205 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Scn9aQ62205 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn9aQ62205 Irf5-202ENSMUST00000163511 2241 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn9aQ62205 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC13.37□□□□□ -0.27
Scn9aQ62205 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Scn9aQ62205 2310043M15Rik-201ENSMUST00000180967 1580 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scn9aQ62205 Gm13848-202ENSMUST00000211663 1560 ntTSL 5 BASIC13.37□□□□□ -0.27
Scn9aQ62205 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn9aQ62205 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn9aQ62205 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.37□□□□□ -0.27
Scn9aQ62205 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn9aQ62205 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Scn9aQ62205 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn9aQ62205 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Scn9aQ62205 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scn9aQ62205 Rasgrp4-205ENSMUST00000159975 2296 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Scn9aQ62205 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scn9aQ62205 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn9aQ62205 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn9aQ62205 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC13.36□□□□□ -0.27
Scn9aQ62205 Gm8226-201ENSMUST00000190511 798 ntBASIC13.36□□□□□ -0.27
Scn9aQ62205 Wbp1-209ENSMUST00000205023 716 ntBASIC13.36□□□□□ -0.27
Scn9aQ62205 Gm45875-201ENSMUST00000212178 781 ntTSL 3 BASIC13.36□□□□□ -0.27
Scn9aQ62205 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC13.36□□□□□ -0.27
Scn9aQ62205 AC154477.1-201ENSMUST00000226515 773 ntBASIC13.36□□□□□ -0.27
Scn9aQ62205 AC137842.2-201ENSMUST00000227734 797 ntBASIC13.36□□□□□ -0.27
Scn9aQ62205 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn9aQ62205 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Scn9aQ62205 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scn9aQ62205 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scn9aQ62205 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC13.36□□□□□ -0.27
Scn9aQ62205 Asph-207ENSMUST00000108333 2652 ntTSL 5 BASIC13.36□□□□□ -0.27
Scn9aQ62205 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn9aQ62205 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Scn9aQ62205 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn9aQ62205 Zfp280d-205ENSMUST00000183468 1834 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scn9aQ62205 Gm33366-201ENSMUST00000195583 3827 ntBASIC13.36□□□□□ -0.27
Scn9aQ62205 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn9aQ62205 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scn9aQ62205 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn9aQ62205 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Scn9aQ62205 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Scn9aQ62205 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC13.36□□□□□ -0.27
Scn9aQ62205 Sfi1-204ENSMUST00000118627 831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn9aQ62205 Gm4775-201ENSMUST00000169588 402 ntBASIC13.36□□□□□ -0.27
Scn9aQ62205 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Scn9aQ62205 Gm8601-201ENSMUST00000182096 909 ntBASIC13.36□□□□□ -0.27
Scn9aQ62205 Gm27316-201ENSMUST00000184884 277 ntBASIC13.36□□□□□ -0.27
Scn9aQ62205 Gm6352-201ENSMUST00000203583 1134 ntBASIC13.36□□□□□ -0.27
Scn9aQ62205 AC117769.1-201ENSMUST00000224716 1120 ntBASIC13.36□□□□□ -0.27
Scn9aQ62205 Dcpp2-201ENSMUST00000088598 611 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn9aQ62205 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn9aQ62205 Tex9-209ENSMUST00000184125 2794 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn9aQ62205 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scn9aQ62205 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Scn9aQ62205 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Scn9aQ62205 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn9aQ62205 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scn9aQ62205 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn9aQ62205 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn9aQ62205 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Scn9aQ62205 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn9aQ62205 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Scn9aQ62205 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn9aQ62205 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn9aQ62205 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn9aQ62205 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn9aQ62205 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn9aQ62205 Gm15540-201ENSMUST00000136052 674 ntTSL 2 BASIC13.35□□□□□ -0.27
Scn9aQ62205 Mir1941-201ENSMUST00000157834 83 ntBASIC13.35□□□□□ -0.27
Scn9aQ62205 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Scn9aQ62205 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Scn9aQ62205 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Scn9aQ62205 Gm26906-201ENSMUST00000180523 1228 ntTSL 5 BASIC13.35□□□□□ -0.27
Scn9aQ62205 Gm5976-201ENSMUST00000180794 996 ntBASIC13.35□□□□□ -0.27
Scn9aQ62205 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC13.35□□□□□ -0.27
Scn9aQ62205 Gm43866-201ENSMUST00000203894 839 ntBASIC13.35□□□□□ -0.27
Scn9aQ62205 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC13.35□□□□□ -0.27
Scn9aQ62205 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC13.35□□□□□ -0.27
Scn9aQ62205 Mt4-201ENSMUST00000034207 398 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn9aQ62205 Rps8-ps4-201ENSMUST00000092523 612 ntBASIC13.35□□□□□ -0.27
Scn9aQ62205 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn9aQ62205 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn9aQ62205 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn9aQ62205 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC13.35□□□□□ -0.27
Scn9aQ62205 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC13.35□□□□□ -0.27
Scn9aQ62205 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn9aQ62205 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Scn9aQ62205 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scn9aQ62205 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Scn9aQ62205 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms