Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctr9Q62018 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Ctr9Q62018 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctr9Q62018 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC13.65□□□□□ -0.22
Ctr9Q62018 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ctr9Q62018 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctr9Q62018 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ctr9Q62018 6030458C11Rik-204ENSMUST00000228177 3156 ntBASIC13.65□□□□□ -0.22
Ctr9Q62018 Gm38089-201ENSMUST00000193585 1514 ntBASIC13.65□□□□□ -0.22
Ctr9Q62018 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC13.65□□□□□ -0.22
Ctr9Q62018 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctr9Q62018 Asph-212ENSMUST00000108340 6646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctr9Q62018 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctr9Q62018 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctr9Q62018 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
Ctr9Q62018 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC13.65□□□□□ -0.22
Ctr9Q62018 Abi1-208ENSMUST00000139038 2899 ntAPPRIS ALT1 TSL 5 BASIC13.65□□□□□ -0.22
Ctr9Q62018 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ctr9Q62018 Prr12-201ENSMUST00000057293 7023 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ctr9Q62018 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ctr9Q62018 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC13.65□□□□□ -0.22
Ctr9Q62018 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.65□□□□□ -0.22
Ctr9Q62018 Gm11246-201ENSMUST00000120880 345 ntBASIC13.65□□□□□ -0.22
Ctr9Q62018 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ctr9Q62018 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC13.65□□□□□ -0.22
Ctr9Q62018 Smim5-202ENSMUST00000142089 685 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctr9Q62018 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ctr9Q62018 Gm6548-201ENSMUST00000167498 1165 ntBASIC13.65□□□□□ -0.22
Ctr9Q62018 Gm37981-201ENSMUST00000194280 535 ntBASIC13.65□□□□□ -0.22
Ctr9Q62018 Gm37634-201ENSMUST00000195700 650 ntTSL 3 BASIC13.65□□□□□ -0.22
Ctr9Q62018 Gm43520-201ENSMUST00000197996 164 ntBASIC13.65□□□□□ -0.22
Ctr9Q62018 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ctr9Q62018 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Ctr9Q62018 Gm45550-201ENSMUST00000209380 946 ntBASIC13.65□□□□□ -0.22
Ctr9Q62018 Gm18065-201ENSMUST00000221395 526 ntBASIC13.65□□□□□ -0.22
Ctr9Q62018 AC115122.1-201ENSMUST00000224850 1040 ntBASIC13.65□□□□□ -0.22
Ctr9Q62018 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctr9Q62018 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ctr9Q62018 Gm5879-201ENSMUST00000089501 1209 ntBASIC13.65□□□□□ -0.22
Ctr9Q62018 Ptgdr-201ENSMUST00000095959 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctr9Q62018 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ctr9Q62018 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
Ctr9Q62018 Gm12992-201ENSMUST00000124738 4493 ntTSL 5 BASIC13.65□□□□□ -0.22
Ctr9Q62018 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Ctr9Q62018 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Ctr9Q62018 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC13.65□□□□□ -0.22
Ctr9Q62018 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctr9Q62018 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Ctr9Q62018 Rapgef2-202ENSMUST00000118340 6544 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ctr9Q62018 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ctr9Q62018 Gm3836-201ENSMUST00000211377 1613 ntBASIC13.64□□□□□ -0.23
Ctr9Q62018 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctr9Q62018 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ctr9Q62018 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctr9Q62018 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctr9Q62018 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Ctr9Q62018 Cyyr1-201ENSMUST00000114174 5464 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctr9Q62018 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctr9Q62018 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctr9Q62018 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.64□□□□□ -0.23
Ctr9Q62018 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC13.64□□□□□ -0.23
Ctr9Q62018 Gm42913-201ENSMUST00000197936 1853 ntBASIC13.64□□□□□ -0.23
Ctr9Q62018 Accs-202ENSMUST00000068513 1872 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Ctr9Q62018 Bckdk-202ENSMUST00000124533 1792 ntTSL 3 BASIC13.64□□□□□ -0.23
Ctr9Q62018 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctr9Q62018 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ctr9Q62018 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Ctr9Q62018 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC13.64□□□□□ -0.23
Ctr9Q62018 Gm14071-201ENSMUST00000117817 509 ntBASIC13.64□□□□□ -0.23
Ctr9Q62018 Gm11244-201ENSMUST00000121243 237 ntBASIC13.64□□□□□ -0.23
Ctr9Q62018 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctr9Q62018 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctr9Q62018 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC13.64□□□□□ -0.23
Ctr9Q62018 Gm5542-201ENSMUST00000195485 1089 ntBASIC13.64□□□□□ -0.23
Ctr9Q62018 Gm9645-201ENSMUST00000197131 792 ntBASIC13.64□□□□□ -0.23
Ctr9Q62018 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ctr9Q62018 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC13.64□□□□□ -0.23
Ctr9Q62018 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Ctr9Q62018 AC122350.1-201ENSMUST00000228135 533 ntBASIC13.64□□□□□ -0.23
Ctr9Q62018 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctr9Q62018 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctr9Q62018 Gm6430-201ENSMUST00000054664 1248 ntBASIC13.64□□□□□ -0.23
Ctr9Q62018 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctr9Q62018 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctr9Q62018 Fam206a-201ENSMUST00000045368 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctr9Q62018 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.64□□□□□ -0.23
Ctr9Q62018 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctr9Q62018 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC13.64□□□□□ -0.23
Ctr9Q62018 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Ctr9Q62018 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctr9Q62018 Gm7841-201ENSMUST00000122108 1629 ntBASIC13.64□□□□□ -0.23
Ctr9Q62018 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctr9Q62018 Rab3c-202ENSMUST00000223922 2398 ntBASIC13.64□□□□□ -0.23
Ctr9Q62018 Klhl6-201ENSMUST00000058839 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Ctr9Q62018 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Ctr9Q62018 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ctr9Q62018 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Ctr9Q62018 Alg12-201ENSMUST00000043087 1793 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Ctr9Q62018 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Ctr9Q62018 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 111.1 ms