Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.98
Foxc1Q61572 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.98
Foxc1Q61572 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Foxc1Q61572 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.98
Foxc1Q61572 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC8.9□□□□□ -0.98
Foxc1Q61572 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Foxc1Q61572 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC8.9□□□□□ -0.98
Foxc1Q61572 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC8.9□□□□□ -0.98
Foxc1Q61572 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Foxc1Q61572 Gm10545-201ENSMUST00000097612 4969 ntTSL 1 (best) BASIC8.9□□□□□ -0.99
Foxc1Q61572 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC8.9□□□□□ -0.99
Foxc1Q61572 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Foxc1Q61572 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Foxc1Q61572 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Foxc1Q61572 Gm43622-201ENSMUST00000200140 2019 ntBASIC8.9□□□□□ -0.99
Foxc1Q61572 Gm43771-201ENSMUST00000202931 1578 ntBASIC8.9□□□□□ -0.99
Foxc1Q61572 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Foxc1Q61572 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC8.9□□□□□ -0.99
Foxc1Q61572 9430038I01Rik-203ENSMUST00000120340 4643 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Foxc1Q61572 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Foxc1Q61572 Bcl2-202ENSMUST00000189999 2841 ntBASIC8.9□□□□□ -0.99
Foxc1Q61572 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.9□□□□□ -0.99
Foxc1Q61572 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC8.9□□□□□ -0.99
Foxc1Q61572 Vmn2r-ps25-201ENSMUST00000202322 2321 ntBASIC8.89□□□□□ -0.99
Foxc1Q61572 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Pcnt-201ENSMUST00000001179 9331 ntAPPRIS P2 TSL 2 BASIC8.89□□□□□ -0.99
Foxc1Q61572 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Foxc1Q61572 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC8.89□□□□□ -0.99
Foxc1Q61572 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC8.89□□□□□ -0.99
Foxc1Q61572 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Zkscan3-207ENSMUST00000223831 2101 ntBASIC8.89□□□□□ -0.99
Foxc1Q61572 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Foxc1Q61572 4933400C23Rik-201ENSMUST00000188610 1708 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC8.89□□□□□ -0.99
Foxc1Q61572 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Arhgap25-202ENSMUST00000101197 2493 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Ttc34-201ENSMUST00000050220 3200 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Prr27-202ENSMUST00000101056 1337 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Gm8862-201ENSMUST00000198379 1346 ntBASIC8.89□□□□□ -0.99
Foxc1Q61572 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC8.89□□□□□ -0.99
Foxc1Q61572 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Cacnb2-203ENSMUST00000114723 3945 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Gm24231-201ENSMUST00000104315 133 ntBASIC8.89□□□□□ -0.99
Foxc1Q61572 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC8.89□□□□□ -0.99
Foxc1Q61572 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Thoc6-203ENSMUST00000115489 1083 ntTSL 5 BASIC8.89□□□□□ -0.99
Foxc1Q61572 Gm15018-201ENSMUST00000117090 633 ntBASIC8.89□□□□□ -0.99
Foxc1Q61572 Gm13506-201ENSMUST00000120391 1083 ntBASIC8.89□□□□□ -0.99
Foxc1Q61572 Gm14999-201ENSMUST00000121039 624 ntBASIC8.89□□□□□ -0.99
Foxc1Q61572 Gm14277-201ENSMUST00000121195 360 ntBASIC8.89□□□□□ -0.99
Foxc1Q61572 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Gm15218-201ENSMUST00000131006 618 ntTSL 5 BASIC8.89□□□□□ -0.99
Foxc1Q61572 Gm16284-201ENSMUST00000140995 400 ntBASIC8.89□□□□□ -0.99
Foxc1Q61572 Gm25043-201ENSMUST00000158604 212 ntBASIC8.89□□□□□ -0.99
Foxc1Q61572 Gm16571-201ENSMUST00000159112 291 ntBASIC8.89□□□□□ -0.99
Foxc1Q61572 Igkv2-95-2-201ENSMUST00000166362 222 ntBASIC8.89□□□□□ -0.99
Foxc1Q61572 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Foxc1Q61572 Gm8922-201ENSMUST00000170057 1167 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Foxc1Q61572 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Foxc1Q61572 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Foxc1Q61572 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC8.89□□□□□ -0.99
Foxc1Q61572 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC8.89□□□□□ -0.99
Foxc1Q61572 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC8.89□□□□□ -0.99
Foxc1Q61572 Gm8897-202ENSMUST00000179679 465 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Foxc1Q61572 Mir6374-201ENSMUST00000184003 107 ntBASIC8.89□□□□□ -0.99
Foxc1Q61572 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC8.89□□□□□ -0.99
Foxc1Q61572 Gm29161-201ENSMUST00000188250 699 ntBASIC8.89□□□□□ -0.99
Foxc1Q61572 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC8.89□□□□□ -0.99
Foxc1Q61572 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC8.89□□□□□ -0.99
Foxc1Q61572 4930590L14Rik-201ENSMUST00000196030 836 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC8.89□□□□□ -0.99
Foxc1Q61572 Gm43946-201ENSMUST00000204058 886 ntBASIC8.89□□□□□ -0.99
Foxc1Q61572 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Gm44585-201ENSMUST00000207150 607 ntBASIC8.89□□□□□ -0.99
Foxc1Q61572 Gm44992-206ENSMUST00000209313 1261 ntTSL 5 BASIC8.89□□□□□ -0.99
Foxc1Q61572 Gm18255-201ENSMUST00000211316 765 ntBASIC8.89□□□□□ -0.99
Foxc1Q61572 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC8.89□□□□□ -0.99
Foxc1Q61572 AC154552.3-201ENSMUST00000220741 444 ntTSL 5 BASIC8.89□□□□□ -0.99
Foxc1Q61572 AC123738.1-201ENSMUST00000224796 773 ntBASIC8.89□□□□□ -0.99
Foxc1Q61572 Fabp4-201ENSMUST00000029041 896 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Gm6460-201ENSMUST00000088616 1168 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Olfr725-201ENSMUST00000089844 1110 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Foxc1Q61572 AC167669.2-201ENSMUST00000224417 1620 ntBASIC8.89□□□□□ -0.99
Foxc1Q61572 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Foxc1Q61572 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms